FC872834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.557e-23 Identity = 61/152 (40.13%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPS-VQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGV 457 VTS HHAAVNFGQY GY PN P+ A + +LPS +Q VMA LD+LS+H+ DEEY+G EPAW+ D ++ AF+ F+ K+ ++ ++ N D RNR+GAG+VPY LL+P + + K V Sbjct: 773 VTSAHHAAVNFGQYPMAGYVPNHPSIARRNMPCEMGPEEMLAFKAAPEKVW---LDTLPSQLQTVMVMATLDLLSSHASDEEYMGTHQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTV 921
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.544e-22 Identity = 60/152 (39.47%), Postives = 78/152 (51.32%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 460 V S HAAVNFGQY GY PNRPT + + L ++ ++++++LSTHS DE YLG+ W + AFEKF K+ E+E ID RN D L+NR G +PY LL P SE GVTG+G+P Sbjct: 706 VASALHAAVNFGQYPVAGYLPNRPTISRQYMPKENTPEFEELEKNPDKVFLKTITAQLQTLLG---ISLIEILSTHSSDEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIP 854
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.486e-21 Identity = 59/150 (39.33%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 11 SGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 460 S HAAVNFGQY YGG NRPT A + P + ++++++LS H+ DE YLG+ P W D AF++F KL +EG I+ARN+DP LRNR G +PY LL SE G+T KG+P Sbjct: 713 SALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYLR---TITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIP 859
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21 Identity = 57/158 (36.08%), Postives = 79/158 (50.00%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSE------PGVTGKGVP 460 + S HAAVNFGQY Y G+ PNRPT + + +H +Q +++L+VLS HS DE YLG+ P W DP F++F +L+E+E + N DP+L+NRNG PY LL P + G+T KG+P Sbjct: 703 IGSALHAAVNFGQYPYAGFLPNRPTVSRRRMPEPGTEEYAELERDPERAFIH---TITSQIQTIIGVSLLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIP 857
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.538e-21 Identity = 59/152 (38.82%), Postives = 77/152 (50.66%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 460 + S HAAVNFGQY Y GY PNRPT + F +Q ++++++LS H+ DE YLG+ P W +D AAFE+F KL ++E I RN + L NR G PY LL P SE G+TGKG+P Sbjct: 707 IASALHAAVNFGQYPYAGYLPNRPTVS---RKFMPEPGTPEYEELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDEIYLGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEGGLTGKGIP 855
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.538e-21 Identity = 59/152 (38.82%), Postives = 78/152 (51.32%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 460 + S HAAVNFGQY Y GY PNRPT + F +Q ++++++LS H+ DE YLG+ P W +D AAF++F KL ++E I RN D L NR+G PY LL P SE G+TGKG+P Sbjct: 708 IASALHAAVNFGQYPYAGYLPNRPTVS---RRFMPEPGTPEYEELKRNPDKAFLKTITAQLQTLLGVSLVEILSRHTTDEIYLGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEGGLTGKGIP 856
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.611e-20 Identity = 58/153 (37.91%), Postives = 80/153 (52.29%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVP 460 + S HAAVNFGQY YGG NRPT + + LP++ + ++++++LSTH+ DE YLG+ P W D AF+KF KL E+E + RN DP L+ NR G +PY LL P SE G+T +G+P Sbjct: 685 IASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTLIS---LSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIP 834
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.104e-20 Identity = 57/158 (36.08%), Postives = 78/158 (49.37%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSE------PGVTGKGVP 460 + S HAAVNFGQY Y GY PNRPT + + + L ++ +++++VLS HS DE YLG+ PAW D AF +F +L+E+EG + N D L+NRNG PY LL P + G+T KG+P Sbjct: 707 IASALHAAVNFGQYPYAGYLPNRPTVSRRRMPEPGTEAYGELGRDPERAFIRTITSQLQTIIG---ISLIEVLSKHSSDEVYLGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIP 861
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.104e-20 Identity = 60/153 (39.22%), Postives = 77/153 (50.33%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIE-PAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 460 + S HAAVNFGQY YGGY NRPT + + P + I++VLS H+ DE+YLG+ IE W D V AF++F KL E+E + RN D LRNR G +PY LL P SE G+T +G+P Sbjct: 712 IASALHAAVNFGQYPYGGYILNRPTKSRKFMPEKGTPEYDDLAKNYEKAYLR---TITPKNDTLTDLTIIEVLSRHASDEQYLGERIEGDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSEEGLTCRGIP 861
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.590e-20 Identity = 57/150 (38.00%), Postives = 76/150 (50.67%), Query Frame = 2 Query: 11 SGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 460 S HAAVNFGQY YGG NRPT + + P Q ++++++LS H+ DE YLG+ P W D AF+KF KL E+E + RN D KLRNR+G +PY LL P S+ G+T +G+P Sbjct: 710 SALHAAVNFGQYSYGGLILNRPT---LSRRFMPEKGSAEFEELVKSPQKAYLKTITPKFQTLIDLSVIEILSRHASDELYLGERDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSKEGLTFRGIP 856 The following BLAST results are available for this feature:
BLAST of FC872834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872834 ID=FC872834; Name=FC872834; organism=Citrus clementina; type=EST; length=627bpback to top |