FC872834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.364e-19 Identity = 55/150 (36.67%), Postives = 75/150 (50.00%), Query Frame = 2 Query: 11 SGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 460 S HAAVNFGQY YGG NRPT + + P Q ++++++LS H+ DE YLG+ P W D AF++F KL ++E + RN D KLRNR G +PY LL P S+ G+T +G+P Sbjct: 706 SALHAAVNFGQYPYGGLILNRPT---LSRRFMPEKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIP 852
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 5.183e-19 Identity = 57/157 (36.31%), Postives = 78/157 (49.68%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFS-----EPGVTGKGVP 460 + S HAAVNFGQY Y G+ PNRPT + + F P +Q ++I+++LS HS DE YLG+ P W D AF++F +L +E I RN D + +NR G +PY LL P + E G+TGKG+P Sbjct: 728 IASALHAAVNFGQYPYAGFLPNRPTVS---RRFMPEPGTDEYAELEEDADVAFLKTITPQLQTLLGISIIEILSMHSTDEIYLGQRDSPNWTADDEPLEAFKRFGKELELIENNIIRRNNDKRFKNRTGPVNIPYTLLYPNTTDYTREGGITGKGIP 881
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.183e-19 Identity = 54/150 (36.00%), Postives = 74/150 (49.33%), Query Frame = 2 Query: 11 SGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 460 S HAAVNFGQY YGG NRPT + + P Q ++++++LS H+ DE YLG+ P W D AF+KF KL E+E + +N DP L +R G +PY LL P S+ G+T +G+P Sbjct: 713 SALHAAVNFGQYPYGGLILNRPT---LSRRLLPEEGTAEYDEMVKSSQKAYLRTITPKFQTLIDLSVIEILSRHASDEVYLGQRENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSKEGLTFRGIP 859
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.572e-18 Identity = 56/159 (35.22%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPS-VQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSE------PGVTGKGVP 460 + S HAAVNFGQY Y GY PNRPT + F I ++ S Q ++++++LS HS DE YLG+ P W DP AF++F +L+E+E + N DP L+NR G PY L+ P + G+T +G+P Sbjct: 704 IASALHAAVNFGQYPYAGYLPNRPTISRRPMPEPGSKEYTELDENPEK----FFIRTITSQFQTILGVSLIEILSKHSADEIYLGQRDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIP 858
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18 Identity = 54/152 (35.53%), Postives = 75/152 (49.34%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 460 + S HAA++FG Y Y GY PNRPT + + +P L S+ ++I +V S H+ DE YLG+ W +D AFE+F L ++E I N+ +NR+G VPY LL P SE G+TGKG+P Sbjct: 706 IASALHAALHFGLYSYAGYLPNRPTLSCNLMPEPGSVEYEELKTNPDKVFLKTFVPQLQSLLE---ISIFEVSSRHASDEVYLGQRDSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSEEGLTGKGIP 854
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18 Identity = 55/153 (35.95%), Postives = 76/153 (49.67%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSE-PGVTGKGVP 460 + S HAAVNFGQY YGG+ NRPT + V+A ++++++LS H+ DE YLG+ P W + AF++F KL E+E I RN D LRNRNG +PY +L P E G+T +G+P Sbjct: 708 IASALHAAVNFGQYPYGGFILNRPTITRRLLPEPGTKEYGELTSNYQKAYLR---TITGKVEAIVDLSVIEILSRHASDEVYLGQRDNPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCEDEGLTFRGIP 857
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.277e-17 Identity = 52/159 (32.70%), Postives = 75/159 (47.17%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSE-------PGVTGKGVP 460 + S HAAVNFGQY Y G+ PNRPT + + F Q ++++++LS HS DE YLG+ P W D AF++F +L+++E I N + L+NRNG +PY LL P + G+T G+P Sbjct: 714 IASALHAAVNFGQYPYAGFLPNRPTVSRRPMPEPGTEEYAKLERGGDEADLVFIHTITSQFQTILGISLIEILSKHSSDEVYLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIP 872
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.277e-17 Identity = 56/151 (37.09%), Postives = 78/151 (51.66%), Query Frame = 2 Query: 11 SGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKV-MAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 460 S HAAVNFGQY YGG+ NRPT++ + ++ S T V ++++++LS H+ DE YLG+ P W D AF+KF KL E+E + +N D L NR G +PY LL P SE G+T +G+P Sbjct: 715 SALHAAVNFGQYPYGGFILNRPTSSRRLLPEKGTPEYEEMVKSHQKAYLR----TITSKFQTLVDLSVIEILSRHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSE-GLTCRGIP 860
BLAST of FC872834 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.178e-17 Identity = 55/158 (34.81%), Postives = 75/158 (47.47%), Query Frame = 2 Query: 5 VTSGHHAAVNFGQYIYGGYFPNRPTTASMQHXXXXXXXXXXXXXXXXXXXMHF*IPSLPSVQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSE------PGVTGKGVP 460 + S HAAVNFGQY Y GY PNRP S+ F +QA +++L++LS HS DE YLG+ P W D AF++F +L E+E + A N DP +NR G PY LL P + G++ +G+P Sbjct: 711 IGSALHAAVNFGQYPYAGYLPNRP---SVSRRPMPEPGTKEYDELARDPEKVFVRTITKQMQAIVGISLLEILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIP 865 The following BLAST results are available for this feature:
BLAST of FC872834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872834 ID=FC872834; Name=FC872834; organism=Citrus clementina; type=EST; length=627bpback to top |