FC872847

Overview
NameFC872847
Unique NameFC872847
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length964
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: TESK2_HUMAN (Dual specificity testis-specific protein kinase 2 OS=Homo sapiens GN=TESK2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.389e-12
Identity = 47/177 (26.55%), Postives = 87/177 (49.15%), Query Frame = 2
Query:  254 IMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD---FEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELI 775
            +M  ++     +    L E+  +  + H N++  +G CV + +   +  Y+ +G L   L       +H+ W +R+++A   A GL++LH      I HR+++SK  L+  D   +   ++DFGLA  +   D  + +      G   ++APE  R      K DV+S+G++L E+I
Sbjct:   83 VMALKMNTLSSNRANMLKEVQLMNRLSHPNILRFMGVCVHQGQLHALTEYINSGNLEQLL----DSNLHLPWTVRVKLAYDIAVGLSYLHFK---GIFHRDLTSKNCLIKRDENGYSAVVADFGLAEKIP--DVSMGSEKLAVVGSPFWMAPEVLRDEPYNEKADVFSYGIILCEII 250          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: MET_MOUSE (Hepatocyte growth factor receptor OS=Mus musculus GN=Met PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.389e-12
Identity = 59/211 (27.96%), Postives = 103/211 (48.82%), Query Frame = 2
Query:  188 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK-ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTH 796
            N +IG G  G  Y   L         C +  + R+ D +    +FL+E   +    H N++ LLG C+  +   L+V  Y+++G L + +    H     D    +   +  A+G+ +L    + + +HR+++++  +LD  F  K++DFGLAR M   + +      G    + ++A E  +T   T K DV+SFGV+L EL+T   P +
Sbjct: 1079 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIEEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 1282          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: M3K9_HUMAN (Mitogen-activated protein kinase kinase kinase 9 OS=Homo sapiens GN=MAP3K9 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 4.389e-12
Identity = 63/212 (29.72%), Postives = 98/212 (46.23%), Query Frame = 2
Query:  194 IIGTGRTGATYIAMLPGGCFIMIKRL-----EDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL-----DGDFEPKL---SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 790
            IIG G  G  Y A   G   + +K       ED   + +    E      ++H N++ L G C+ +    LV  +   G L   L         +   + +  A+  ARG+ +LH      IIHR++ S  IL+     +GD   K+   +DFGLAR     + H +T ++   G   ++APE  R  + +   DV+S+GV+L EL+TGE P
Sbjct:  149 IIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR-----IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAA-GTYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 348          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: HCK_MACFA (Tyrosine-protein kinase HCK OS=Macaca fascicularis GN=HCK PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 4.389e-12
Identity = 53/194 (27.32%), Postives = 97/194 (50.00%), Query Frame = 2
Query:  197 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 778
            +G G+ G  ++A       + +K ++    S + FL+E N + +++H  LV L    V K+   ++  ++  G+L D L   E     +  P  +  +   A G+A++        IHR++ +  IL+      K++DFGLAR+   I+ +  T   G    + + APE      +T K DV+SFG++L+E++T
Sbjct:  246 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANLMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARI---IEDNEYTAREGAKFPIKWTAPEAINFGSSTIKSDVWSFGILLMEIVT 430          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: SRK2_SPOLA (Tyrosine-protein kinase SRK2 (Fragment) OS=Spongilla lacustris GN=SRK2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.732e-12
Identity = 54/195 (27.69%), Postives = 95/195 (48.72%), Query Frame = 2
Query:  197 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH-HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 778
            +G G+ G  Y  +      + +K L+        FL+E   +  +RH  L+ L   C   +   ++   +  G+L D L   + E   +  P  + +A   A G+A+L  HN     IHR+++++ IL+  +   K++DFGLARL+   D + +    G    + + APE       + K DV+SFG+++ EL+T
Sbjct:  101 LGAGQFGEVYQGLWNNSTPVAVKTLKAGTMQPAAFLAEAQIMKKLRHPKLIQLYAVCTQGEPVYIITELMSKGSLLDYL---QGEAGALKLPQLIDMAAQVAAGMAYLELHN----YIHRDLAARNILVGDNNICKVADFGLARLIVSDDYNAT---EGAKFPIKWTAPEAALFNRFSIKSDVWSFGILITELVT 285          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: SRC_RSVSE (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain Schmidt-Ruppin E) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 5.732e-12
Identity = 65/230 (28.26%), Postives = 107/230 (46.52%), Query Frame = 2
Query:   98 TKGIKVSAFEKSVEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGER 787
            T+G+   A+E   E +RL   +            G G  G  ++    G   + IK L+    S + FL E   +  +RH+ LV L    V+++   +V  Y+  G+L D L     + + +  P  + +A   A G+A++        +HR++ +  IL+  +   K++DFGLARL   I+ +  T   G    + + APE       T K DV+SFG++L EL T  R
Sbjct:  252 TQGLAKDAWEIPRESLRLEVKL------------GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHKKLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 460          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: SRC64_DROME (Tyrosine-protein kinase Src64B OS=Drosophila melanogaster GN=Src64B PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 5.732e-12
Identity = 52/194 (26.80%), Postives = 91/194 (46.91%), Query Frame = 2
Query:  197 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 778
            +G G  G  +         + +K L +   S   FL E   +   RH  LV L   C  ++   +V  Y+  G+L D L   +   +H +    + IA   A G+ +L    + ++IHR+++++ +L+  +   K+ DFGLAR++   D          F  + + APE       + K DV+S+G++L+EL T
Sbjct:  290 LGRGNFGEVFYGKWRNSIDVAVKTLREGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYMSKGSLLDFLREGDGRYLHFED--LIYIATQVASGMEYLE---SKQLIHRDLAARNVLIGENNVAKICDFGLARVI--ADDEYCPKQGSRF-PVKWTAPEAIIYGKFSIKSDVWSYGILLMELFT 475          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: NEK2_HUMAN (Serine/threonine-protein kinase Nek2 OS=Homo sapiens GN=NEK2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.732e-12
Identity = 57/200 (28.50%), Postives = 88/200 (44.00%), Query Frame = 2
Query:  197 IGTGRTGATY-IAMLPGGCFIMIKRLEDSQHSEKE---FLSEINTLGSVRHRNLVPLLGFCVAKKERLL--VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNP--RIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLEL 772
            IGTG  G    I     G  ++ K L+    +E E    +SE+N L  ++H N+V      + +    L  V  Y E G L   +     E  ++D    LR+       L   H   +    ++HR++    + LDG    KL DFGLAR++N   +   TFV   +    Y++PE    +    K D++S G +L EL
Sbjct:   14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY----YMSPEQMNRMSYNEKSDIWSLGCLLYEL 209          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: MET_RAT (Hepatocyte growth factor receptor OS=Rattus norvegicus GN=Met PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.732e-12
Identity = 59/211 (27.96%), Postives = 103/211 (48.82%), Query Frame = 2
Query:  188 NNIIGTGRTGATYIAMLPGG------CFIM-IKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK-ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTH 796
            N +IG G  G  Y   L         C +  + R+ D +    +FL+E   +    H N++ LLG C+  +   L+V  Y+++G L + +    H     D    +   +  A+G+ +L    + + +HR+++++  +LD  F  K++DFGLAR M   + +      G    + ++A E  +T   T K DV+SFGV+L EL+T   P +
Sbjct: 1082 NEVIGRGHFGCVYHGTLLDSDGKKIHCAVKSLNRITDIEEVS-QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---VSKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 1285          
BLAST of FC872847 vs. ExPASy Swiss-Prot
Match: ITK_HUMAN (Tyrosine-protein kinase ITK/TSK OS=Homo sapiens GN=ITK PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.732e-12
Identity = 50/194 (25.77%), Postives = 99/194 (51.03%), Query Frame = 2
Query:  197 IGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT 778
            IG+G+ G  ++        + IK + +   SE++F+ E   +  + H  LV L G C+ +    LV+ ++E+G L D L   +  +   +    L + +    G+A+L   C   +IHR+++++  L+  +   K+SDFG+ R +  +D   ++    +F  + + +PE       + K DV+SFGV++ E+ +
Sbjct:  369 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 553          
The following BLAST results are available for this feature:
BLAST of FC872847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TESK2_HUMAN4.389e-1226.55Dual specificity testis-specific protein kinase 2 ... [more]
MET_MOUSE4.389e-1227.96Hepatocyte growth factor receptor OS=Mus musculus ... [more]
M3K9_HUMAN4.389e-1229.72Mitogen-activated protein kinase kinase kinase 9 O... [more]
HCK_MACFA4.389e-1227.32Tyrosine-protein kinase HCK OS=Macaca fascicularis... [more]
SRK2_SPOLA5.732e-1227.69Tyrosine-protein kinase SRK2 (Fragment) OS=Spongil... [more]
SRC_RSVSE5.732e-1228.26Tyrosine-protein kinase transforming protein Src O... [more]
SRC64_DROME5.732e-1226.80Tyrosine-protein kinase Src64B OS=Drosophila melan... [more]
NEK2_HUMAN5.732e-1228.50Serine/threonine-protein kinase Nek2 OS=Homo sapie... [more]
MET_RAT5.732e-1227.96Hepatocyte growth factor receptor OS=Rattus norveg... [more]
ITK_HUMAN5.732e-1225.77Tyrosine-protein kinase ITK/TSK OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2AB03ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2AB03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872847 ID=FC872847; Name=FC872847; organism=Citrus clementina; type=EST; length=964bp
GGGGGGTATTTTTCTGTTTTGCTTCATGCGTGGTGTGTACGTTAAGAAGA
AGGAAGATGACCCTGAGGGCAACAAATGGGCAAAAAGGATAAAAGGAACA
AAGGGCATCAAGGTTTCAGCATTTGAGAAGTCAGTTGAAAAAATGAGGTT
GAGCGATCTTATGAAAGCGACTAATAGCTTTAGCAAAAACAACATCATTG
GGACAGGAAGAACGGGGGCAACGTACATAGCAATGCTTCCAGGTGGTTGT
TTCATAATGATCAAGAGGTTGGAAGACTCTCAGCATTCGGAGAAAGAATT
TTTGTCTGAAATCAATACTCTAGGGAGCGTTAGACACCGCAACTTGGTTC
CTCTTTTGGGTTTTTGCGTGGCAAAGAAGGAAAGACTTTTGGTGTACAGT
TACCTGGAAAATGGGACACTTTACGATAAACTACATCCAGCAGAACACGA
GGTCATGCACATGGACTGGCCTTTGAGGCTCCGAATTGCAATTGGATCAG
CTAGAGGTCTGGCATGGCTCCATCACAACTGTAACCCTCGGATTATACAT
AGAAACATAAGCTCTAAATGCATTCTGTTGGATGGTGATTTTGAACCGAA
GTTGTCTGATTTTGGCCTTGCAAGGCTTATGAACCCAATTGACACTCATT
TGAGTACTTTTGTCAATGGGGAGTTCGGAGATTTAGGTTATGTTGCTCCT
GAATATCCACGGACGCTGGTAGCCACCCCAAAGGGGGATGTTTATAGCTT
TGGAGTTGTTCTCCTGGAACTGATCACAGGTGAGAGACCAACTCATTTAA
CTAATGCCCCTGAGAGCTTCGAGGGAAGTTTAGTGGAGTGGATCACACTT
CTGAACACTAACTCTTCTCTGGAAACTGCAGTTGATAAGTCCCTGCTTGG
AAATGGTTTTGATGGTGAACTCCACCAATTTCTTAAGGGTTGCTTGTAAC
TGTGTGTTGCCAAC
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