FC872848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_RHOFD (Serine hydroxymethyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glyA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 31 EDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 417 E IN A+FP LQGGP H + A AVA K+A P FK Y +QV NA + L +G +V+G TE+H++L DLR +TG + E + ++T+NKNA+ D + GVRIGTPAMT+RG +++ Sbjct: 246 EKAINSAIFPGLQGGPLMHVIAAKAVAFKEALQPEFKVYQQQVLTNARVVAETLVSRGLRIVSGRTESHVMLVDLRSKSITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKDEE 375
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_MYCMS (Serine hydroxymethyltransferase OS=Mycoplasma mycoides subsp. mycoides SC GN=glyA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 60/145 (41.38%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR-PLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 453 +F K++ AVFP QGGP + + AL +AST FK Y KQ+ N AL N L G LV GG++NHL+ D++ L +TG K EK+ + I NKN + F G+R+GTPAMT+RG E++F+Q+G + A+ Sbjct: 239 EFAKKVDLAVFPGSQGGPLENLIAGKTQALLEASTDEFKEYGKQIVKNTKALANVLQENGLRLVAGGSDNHLINVDVKSTLRITGKKAEKILESIGIICNKNMIPFDTEKPFYTSGIRLGTPAMTTRGFKEEEFKQVGLIIVNAL 383
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_KOSOT (Serine hydroxymethyltransferase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glyA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 66/174 (37.93%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 40 INFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV--------TLTLEIQKEYGKLLKDFNKGLVNNKDI 534 IN AVFP +QGGP H + A AVA +A FK Y ++ NA AL L G +V+GGT+ HL L DL P +TG EK + +ITVNKN + ++ S G+RIGTPA+T+RG+ E + + I E + + + T+ EI++E K + + + KD+ Sbjct: 248 INKAVFPGIQGGPLMHVIAAKAVAFGEALKDEFKEYQMRIITNAKALAKELENLGLRIVSGGTDTHLFLVDLNPKNVTGKAAEKALESADITVNKNTIPKETRSPFVTSGIRIGTPAVTTRGMGESEMKVIAELIVKVIDNIQDEKGTIPEEIREEVKKAVHELTEKFPLYKDL 421
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPS (Serine hydroxymethyltransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=glyA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 59/135 (43.70%), Postives = 82/135 (60.74%), Query Frame = 1 Query: 52 VFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 453 +FP +QGGP H + A AV K+A P+FK Y +QV NA L L G+ LV+ GT+NHL+L DL +TG E L D IT+NKN V ++ S GVRIGTPA+T+RG E++ ++I ++ A+ Sbjct: 252 IFPGIQGGPLMHIIAAKAVCFKEALEPSFKTYMEQVVKNAHVLAEALESYGFKLVSNGTDNHLILVDLTNKDITGKDAEILLDSIGITLNKNTVPNETRSPFVTSGVRIGTPAITTRGFKEEEMKEIASIINDAI 386
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPE (Serine hydroxymethyltransferase OS=Clostridium perfringens GN=glyA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 59/135 (43.70%), Postives = 82/135 (60.74%), Query Frame = 1 Query: 52 VFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 453 +FP +QGGP H + A AV K+A P+FK Y +QV NA L L G+ LV+ GT+NHL+L DL +TG E L D IT+NKN V ++ S GVRIGTPA+T+RG E++ ++I ++ A+ Sbjct: 252 IFPGIQGGPLMHIIAAKAVCFKEALEPSFKTYMEQVVKNAHVLAEALEAYGFKLVSNGTDNHLILVDLTNKDITGKDAEILLDSIGITLNKNTVPNETRSPFVTSGVRIGTPAITTRGFKEEEMKEIASIINDAI 386
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK5 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=glyA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = 1 Query: 7 PEGAVYDFEDKINFA----VFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 453 P G ++K A +FP +QGGP H + A AV +A +K Y Q+ NA G L G+ LV+GGT+NHL+L DL +TG +E+L D NITVNKNA+ F G+R+GTPA+T+RG E++ +++ F+++AV Sbjct: 233 PRGGAIICKEKYGAALDKTIFPGIQGGPLMHIIAAKAVCFGEALKDEYKEYIDQIIKNAKVFGEELVKYGFRLVSGGTDNHLLLVDLTNKNITGKDLEELLDKVNITVNKNAIPFDKLKPNVTSGIRVGTPAVTTRGFKEEEMKKVAYFINKAV 386
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK1 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=glyA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = 1 Query: 7 PEGAVYDFEDKINFA----VFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 453 P G ++K A +FP +QGGP H + A AV +A +K Y Q+ NA G L G+ LV+GGT+NHL+L DL +TG +E+L D NITVNKNA+ F G+R+GTPA+T+RG E++ +++ F+++AV Sbjct: 233 PRGGAIICKEKYGAALDKTIFPGIQGGPLMHIIAAKAVCFGEALKDEYKEYIDQIIKNAKVFGEELVKYGFRLVSGGTDNHLLLVDLTNKNITGKDLEELLDKVNITVNKNAIPFDKLKPNVTSGIRVGTPAVTTRGFKEEEMKKVAYFINKAV 386
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_BACV8 (Serine hydroxymethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=glyA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 63/153 (41.18%), Postives = 87/153 (56.86%), Query Frame = 1 Query: 7 PEGAVYDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL--GLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 456 P+G + ++ AVFP +QGGP H + A AVA + P +K Y QVK NA L L +G+++V+GGT+NH +L DLR LTG EK +ITVNKN V F SA G+R+GTPA+T+RG E +I E + ++ Sbjct: 247 PKGEIKMMSQLLDSAVFPGIQGGPLEHVIAAKAVAFGECLQPEYKEYQTQVKKNAAVLAQALIDRGFTIVSGGTDNHSMLVDLRTKYPDLTGKVAEKALVAADITVNKNMVPFDSRSAFQTSGIRLGTPAITTRGAKEDLMLEIAEMIETVLS 399
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_BACFR (Serine hydroxymethyltransferase OS=Bacteroides fragilis GN=glyA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 63/153 (41.18%), Postives = 88/153 (57.52%), Query Frame = 1 Query: 7 PEGAVYDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL--GLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 456 P+G + ++ AVFP +QGGP H + A AVA + P +K Y KQV+ NA L L +G+++V+GGT+NH +L DLR LTG EK +ITVNKN V F SA G+R+GTPA+T+RG E +I E + ++ Sbjct: 247 PKGEIKMMSQLLDSAVFPGIQGGPLEHVIAAKAVAFGECLQPEYKEYQKQVQKNAAVLAQALIDRGFTIVSGGTDNHSMLVDLRSKYPTLTGKVAEKALVSADITVNKNMVPFDSRSAFQTSGIRLGTPAITTRGAKEDLMLEIAEMIETVLS 399
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_BACFN (Serine hydroxymethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=glyA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 63/153 (41.18%), Postives = 88/153 (57.52%), Query Frame = 1 Query: 7 PEGAVYDFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL--GLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 456 P+G + ++ AVFP +QGGP H + A AVA + P +K Y KQV+ NA L L +G+++V+GGT+NH +L DLR LTG EK +ITVNKN V F SA G+R+GTPA+T+RG E +I E + ++ Sbjct: 247 PKGEIKMMSQLLDSAVFPGIQGGPLEHVIAAKAVAFGECLQPEYKEYQKQVQKNAAVLAQALIDRGFTIVSGGTDNHSMLVDLRSKYPTLTGKVAEKALVSADITVNKNMVPFDSRSAFQTSGIRLGTPAITTRGAKEDLMLEIAEMIETVLS 399 The following BLAST results are available for this feature:
BLAST of FC872848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872848 ID=FC872848; Name=FC872848; organism=Citrus clementina; type=EST; length=704bpback to top |