FC872848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_OLICO (Serine hydroxymethyltransferase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29 Identity = 66/140 (47.14%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 D KIN A+FP LQGGP H + A AVA K+A P FK YAK + NA AL L G G+ +V+GGT+NHL+L DLRP GL GN E+ +T NKN + F G+R+GTPA T+RG +F+Q+G + Sbjct: 257 DIAKKINSAIFPGLQGGPLMHVIAAKAVAFKEALQPDFKVYAKNIVENARALAETLRGHGFEIVSGGTDNHLMLVDLRPKGLKGNISERALVRSGLTCNKNGIPFDPEKPFVTSGLRLGTPATTTRGFGVAEFKQVGALI 396
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_OCEIH (Serine hydroxymethyltransferase OS=Oceanobacillus iheyensis GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29 Identity = 68/157 (43.31%), Postives = 98/157 (62.42%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKL 492 +F K++ A+FP +QGGP H + A AV+ K+A + FKAY+KQ+ ANA LG L +G +V+GGT+NHL+L D+ PL LTG EK D IT NKN + F S G+RIGT A+T+RG E++ ++I ++LTL+ ++ KL Sbjct: 241 EFAKKVDKAIFPGIQGGPLMHVIAAKAVSFKEALSDDFKAYSKQIVANAKLLGEALNKEGIRIVSGGTDNHLLLLDVTPLQLTGKVAEKALDDIGITTNKNTIPFDQESPFVTSGIRIGTAAVTTRGFGEEEMKEIASI----ISLTLKHHEDEAKL 393
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_BRASO (Serine hydroxymethyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=glyA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29 Identity = 67/139 (48.20%), Postives = 84/139 (60.43%), Query Frame = 1 Query: 28 FEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 F K N A+FP LQGGP H + A AVA +A P FKAYAK V NA AL L +G+ +V+GGT+NHL+L DLRP GL GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G + Sbjct: 258 FTKKFNSAIFPGLQGGPLMHVIAAKAVAFAEALRPEFKAYAKNVVENAKALAESLRAQGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAAITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGSLI 396
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_SYNAS (Serine hydroxymethyltransferase OS=Syntrophus aciditrophicus (strain SB) GN=glyA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29 Identity = 67/166 (40.36%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 28 FEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV------TLTLEIQKEYGKLLKDF 504 ++ ++ VFP +QGGP H + A AVA K+A T FK Y Q+ NA AL L G+GY LV+GGT+NHL+L DL GLTG + ++ D ITVNKN + F + G+RIGTPA+TSRG+ E++ I + + + +++E G+L ++F Sbjct: 242 YQKTLSSRVFPGVQGGPLMHIIAAKAVAFKEALTDEFKDYQSQIVKNAQALAKELIGRGYRLVSGGTDNHLLLMDLTDKGLTGKEAQESLDSAGITVNKNGIPFDTRGPMVTSGIRIGTPALTSRGMKEEEMRTIARLIAEVLEHRDNEKHLMAVKEEVGRLCQNF 407
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_BRASB (Serine hydroxymethyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=glyA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29 Identity = 65/139 (46.76%), Postives = 84/139 (60.43%), Query Frame = 1 Query: 28 FEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 F K+N A+FP LQGGP H + A AVA +A P FK YAK + NA AL L +G+ +V+GGT+NHL+L DLRP GL GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G + Sbjct: 259 FTKKLNSAIFPGLQGGPLMHVIAAKAVAFAEALRPEFKTYAKNIVENAKALAESLRAQGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAGITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGSLI 397
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA2_PHOPR (Serine hydroxymethyltransferase 2 OS=Photobacterium profundum GN=glyA2 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29 Identity = 75/188 (39.89%), Postives = 98/188 (52.13%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEA-LKADVEKFASSFDM 582 D KIN AVFP LQGGP H + AVA +A P FK Y K V +NA L L +G +VT GT+ HL+L DLRP GL GN E + IT NKN + F + G+R+GTPA TSRG +F+QIGE++ G +L +N ++E +K V+K S F + Sbjct: 256 DINKKINSAVFPGLQGGPLMHVIAGKAVAFGEALEPDFKIYIKNVISNAKVLAEVLQNRGCDIVTNGTDTHLMLVDLRPKGLKGNAAENALERAGITCNKNGIPFDTEKPMVTSGIRLGTPAGTSRGFGNDEFKQIGEWI--------------GDVLDGLAANPEDNSEVEKHVKQQVQKLCSRFPL 429
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_SILST (Serine hydroxymethyltransferase OS=Silicibacter sp. (strain TM1040) GN=glyA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 65/144 (45.14%), Postives = 87/144 (60.42%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 453 D K N A+FP +QGGP H + A A +A P FK+Y KQV+ANAVAL + L G +VTGGT+ H++L DLRP G+TGN V+K +IT NKN + F G+R+GTPA T+RG E++F +I + V Sbjct: 253 DLAKKFNSAIFPGIQGGPLMHVIAGKAAAFGEALKPEFKSYQKQVRANAVALADELIKGGLDIVTGGTDTHVMLVDLRPKGVTGNIVDKALGRAHITTNKNGIPFDPEKPTVTSGIRLGTPAGTTRGFGEEEFREIARLIVEVV 396
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_RICBR (Serine hydroxymethyltransferase OS=Rickettsia bellii (strain RML369-C) GN=glyA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 66/136 (48.53%), Postives = 85/136 (62.50%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 KIN A+FP LQGGP H + A AVA ++ P +K+Y KQV NA AL L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F +S G+R+GTPA T+RG EKDF +G + Sbjct: 250 KINSALFPGLQGGPLMHIIAAKAVAFLESLQPEYKSYIKQVIINAKALAGSLQERGYDILTGGTDNHIVLVDLRKDGITGKIAANSLDRAGITCNKNAIPFDKTSPFITSGIRLGTPACTTRGFKEKDFVLVGHLI 385
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_RICB8 (Serine hydroxymethyltransferase OS=Rickettsia bellii (strain OSU 85-389) GN=glyA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 66/136 (48.53%), Postives = 85/136 (62.50%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 KIN A+FP LQGGP H + A AVA ++ P +K+Y KQV NA AL L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F +S G+R+GTPA T+RG EKDF +G + Sbjct: 250 KINSALFPGLQGGPLMHIIAAKAVAFLESLQPEYKSYIKQVIINAKALAGSLQERGYDILTGGTDNHIVLVDLRKDGITGKIAANSLDRAGITCNKNAIPFDKTSPFITSGIRLGTPACTTRGFKEKDFVLVGHLI 385
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_RHOP5 (Serine hydroxymethyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=glyA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 66/133 (49.62%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 432 K N A+FP LQGGP H + A AVA K+A P FK YAK V NA AL L G G+ +V+GGT+NHL+L DLRP L GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G Sbjct: 261 KFNSAIFPGLQGGPLMHVIAAKAVAFKEALQPDFKVYAKNVVENAKALAETLRGHGFDIVSGGTDNHLMLVDLRPKALKGNVSEKALVRAGITCNKNGIPFDPEKPFVTSGIRLGTPAATTRGFGVAEFQQVG 393 The following BLAST results are available for this feature:
BLAST of FC872848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872848 ID=FC872848; Name=FC872848; organism=Citrus clementina; type=EST; length=704bpback to top |