FC872848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_RHOP2 (Serine hydroxymethyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=glyA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 67/136 (49.26%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 K N A+FP LQGGP H + A AVA K+A P FK YAK V NA AL L G+ LV+GGT+NHL+L DLRP GL GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G + Sbjct: 261 KFNSAIFPGLQGGPLMHVIAAKAVAFKEALQPDFKVYAKNVVENAKALAETLRAAGFDLVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAAITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGNLI 396
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_FERNB (Serine hydroxymethyltransferase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=glyA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 69/170 (40.59%), Postives = 103/170 (60.59%), Query Frame = 1 Query: 40 INFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALK 546 IN A+FP +QGGP H + A AV K+A + FKAY Q+ NA AL L +G +V+GGT+ HL+L DL PL +TG E C+ITVNKN + ++ S G+R+GTPA+T+RG+ E+ E+I + + VT+ ++ E G + ++ K V+++ IE K Sbjct: 248 INKAIFPGIQGGPLMHVIAAKAVCFKEALSDEFKAYQNQIVKNAKALAKALENRGLRIVSGGTDTHLMLVDLNPLNVTGKAAETALGYCHITVNKNTIPNETRSPFVASGIRLGTPALTTRGMKEEQMEEIADLI---VTVLKNVKDEEGNVDEEVAK-RVSDRVIELCK 413
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_DESVV (Serine hydroxymethyltransferase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=glyA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 74/178 (41.57%), Postives = 98/178 (55.06%), Query Frame = 1 Query: 1 GQPEGAVYDFEDK---INFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV------TLTLEIQKEYGKLLKDF 504 G G + ED +N +FP +QGGP H + A AVA +A PAFK Y KQV NA AL LT G+ LV+GGT+NHL+L DL +TG E D ITVNKN V F S GVR+GTPA+T+RG+ + E++G ++ A+ T EI +E + + F Sbjct: 230 GPRGGMILSTEDNGKTLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPAFKEYQKQVVDNAAALAGVLTAAGFDLVSGGTDNHLMLVDLTSKDVTGKDAEIALDKAGITVNKNTVPFETRSPFVTSGVRLGTPALTTRGMKAAEMEKVGGWIVDAIANTTNETRLAEISREVERFARQF 407
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_DESVH (Serine hydroxymethyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=glyA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 74/178 (41.57%), Postives = 98/178 (55.06%), Query Frame = 1 Query: 1 GQPEGAVYDFEDK---INFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV------TLTLEIQKEYGKLLKDF 504 G G + ED +N +FP +QGGP H + A AVA +A PAFK Y KQV NA AL LT G+ LV+GGT+NHL+L DL +TG E D ITVNKN V F S GVR+GTPA+T+RG+ + E++G ++ A+ T EI +E + + F Sbjct: 230 GPRGGMILSTEDNGKTLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPAFKEYQKQVVDNAAALAGVLTAAGFDLVSGGTDNHLMLVDLTSKDVTGKDAEIALDKAGITVNKNTVPFETRSPFVTSGVRLGTPALTTRGMKAAEMEKVGGWIVDAIANTTNETRLAEISREVERFARQF 407
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_DESRM (Serine hydroxymethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=glyA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 66/146 (45.21%), Postives = 93/146 (63.70%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 459 ++ I+ A+FP QGGP H + A A A +A P FKAY +Q+ NA AL L +G++LV+GGT+NHL+L DLR G+TG + E L D +IT NKNA+ F G+R+GTPA+T+RG EKD +++ E + A+TL Sbjct: 243 EYAQLIDKAIFPGSQGGPLMHVIAAKAAAFGEALKPEFKAYQQQIINNAQALAKGLLERGFNLVSGGTDNHLILVDLRGTGITGKQAETLLDEVHITCNKNAIPFDPEKPFVTSGIRLGTPAVTTRGFKEKDMDKVAEII--ALTL 386
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_RICM5 (Serine hydroxymethyltransferase OS=Rickettsia massiliae (strain Mtu5) GN=glyA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.018e-28 Identity = 73/174 (41.95%), Postives = 98/174 (56.32%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADV 555 KIN A+FP LQGGP H + A AVA + P +K+Y +QV +NA AL + L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF + G ++ D GL NN+D L+ V Sbjct: 250 KINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKFAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLV------------------GYMVADILDGLKNNEDNSDLEQKV 405
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_CYAP8 (Serine hydroxymethyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glyA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.018e-28 Identity = 64/140 (45.71%), Postives = 90/140 (64.29%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 D + + AVFP QGGP H + A VA +A P FKAY+ QV AN+ AL L +G+ LV+GGT+NHL+L DLR +G+TG + ++L NIT NKN V F S G+R+G+PA+T+RG+ E +F++IG + Sbjct: 247 DLGKQFDKAVFPGTQGGPLEHVIAAKGVAFGEALKPQFKAYSGQVIANSRALAAQLMERGFKLVSGGTDNHLMLVDLRSIGMTGKEADRLVSEINITANKNTVPFDPESPFVTSGLRLGSPALTTRGMGESEFKEIGNII 386
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_BACHD (Serine hydroxymethyltransferase OS=Bacillus halodurans GN=glyA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.018e-28 Identity = 69/149 (46.31%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLE 468 +F +I+ ++FP +QGGP H + A AVA +A P FK+Y + + NA LG LT +G LV+GGT+NHL+L DLR LGLTG EK D IT NKN + F S G+RIGT A+TSRGL E+ ++IG + LTL+ Sbjct: 241 EFAKQIDKSIFPGIQGGPLMHVIAAKAVAFGEALQPEFKSYGEAIIRNAKRLGEKLTSEGIDLVSGGTDNHLLLLDLRSLGLTGKVAEKALDDVGITTNKNTIPFDPESPFVTSGIRIGTAAVTSRGLDEEAMDEIG----ATIALTLK 385
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_SYNFM (Serine hydroxymethyltransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=glyA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.635e-28 Identity = 68/178 (38.20%), Postives = 99/178 (55.62%), Query Frame = 1 Query: 52 VFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDM 582 +FP +QGGP H + A AVA ++A P+FK Y ++V A+A AL L GY LV+GGT+NHL+L DL P G+TG E+ D ITVNKN++ F G+RIGTPA+ +RG+L + + F+HR + K + + L+A+V +F S+F + Sbjct: 250 IFPGIQGGPLMHVIAAKAVAFREALQPSFKEYQQRVVADAAALAQELKALGYRLVSGGTDNHLMLVDLTPQGVTGRVAEETLDKAGITVNKNSIPFDQQKPQVTSGIRIGTPALATRGILPHHMKAVAGFMHRGL------------------KSAGDEPALARLRAEVAEFCSAFPL 409
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_RHOPB (Serine hydroxymethyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=glyA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.635e-28 Identity = 70/151 (46.36%), Postives = 87/151 (57.62%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYG 486 K N A+FP LQGGP H + A AVA K+A P FK YAK V NA AL L G G+ +V+GGT+NHL+L DLRP L GN EK IT NKN + + G+R+GTPA T+RG +F+Q+G + A L Q E G Sbjct: 268 KFNSAIFPGLQGGPLMHVIAAKAVAFKEALQPDFKVYAKNVVENAKALAETLRGHGFDIVSGGTDNHLMLVDLRPKSLKGNVSEKALVRAGITCNKNGIPYDPEKPFVTSGIRLGTPAATTRGFGVAEFQQVGGMI--AEVLNAIAQSEDG 416 The following BLAST results are available for this feature:
BLAST of FC872848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872848 ID=FC872848; Name=FC872848; organism=Citrus clementina; type=EST; length=704bpback to top |