FC872848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_MYXXD (Serine hydroxymethyltransferase OS=Myxococcus xanthus (strain DK 1622) GN=glyA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.635e-28 Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = 1 Query: 40 INFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 453 IN +FP +QGGP H + AVA K+A +P FKAY +Q+ ANA AL L G L +GGT+NHL+L DLRP LTG E++ D ITVNKN + F + GVR+GTPA+T+RG+ E + +G + A+ Sbjct: 249 INSQIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQRQIVANAKALAEALQRAGLRLTSGGTDNHLMLVDLRPKKLTGKVAEEVLDKAGITVNKNMIPFDPEKPMTTSGVRVGTPAITTRGMREAEMAVVGRLIGEAL 387
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_MICAN (Serine hydroxymethyltransferase OS=Microcystis aeruginosa (strain NIES-843) GN=glyA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.635e-28 Identity = 66/136 (48.53%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 K + +VFP QGGP H V A AVA +A P FK Y+ QV ANA AL L +G +VT GT+NHL+L DLR +G+TG + ++L NIT NKN V F S G+R+G+PAMT+RGL E +F +IG + Sbjct: 251 KFDKSVFPGTQGGPLEHVVAAKAVAFGEALKPEFKIYSGQVIANAQALAGQLKARGIKIVTDGTDNHLMLLDLRSVGMTGKEADRLVSTINITANKNTVPFDPESPFVTSGLRLGSPAMTTRGLGETEFIEIGNII 386
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_GEOBB (Serine hydroxymethyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=glyA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.635e-28 Identity = 66/140 (47.14%), Postives = 84/140 (60.00%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 D+ +N +FP +QGGP H + A AVA K+A TP FK Y Q+ NA AL LT +G+ L +GGT+NHL+L DL LTG E+ D ITVNKN + F S G+RIGTPA TS GL E + EQ+ F+ Sbjct: 241 DWAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALTPEFKQYQGQIVKNAKALAEGLTKRGFKLTSGGTDNHLMLVDLSQTELTGKVAEEALDRAGITVNKNGIPFDTRSPFITSGIRIGTPAATSHGLKEAEMEQVAGFI 380
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAD (Serine hydroxymethyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=glyA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.635e-28 Identity = 65/140 (46.43%), Postives = 90/140 (64.29%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 +F +IN +VFP QGGP H + AVA +A P FK YA Q++ NA AL L +G +LV+GGT+NHL+L DLR GLTG + ++ D ITVNKNA+ D + G+RIGTPA+T+RG+ E++ QI ++ Sbjct: 242 EFAKQINSSVFPGTQGGPLMHVIAGKAVAFGEALRPEFKQYAAQIRRNAKALAEGLHAQGLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKNAIPDDPQPPMKTSGIRIGTPAVTTRGMREREMAQIAAWI 381
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA1_RHOPA (Serine hydroxymethyltransferase 1 OS=Rhodopseudomonas palustris GN=glyA1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.635e-28 Identity = 66/136 (48.53%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 K N A+FP LQGGP H + A AVA K+A P FK Y K V NA AL L G+ LV+GGT+NHL+L DLRP GL GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G + Sbjct: 260 KFNSAIFPGLQGGPLMHVIAAKAVAFKEALQPDFKVYTKNVVENAKALAETLRSAGFDLVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAGITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGHLI 395
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA1_RHILO (Serine hydroxymethyltransferase 1 OS=Rhizobium loti GN=glyA1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.635e-28 Identity = 66/140 (47.14%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 D K+N AVFP LQGGP H + A AVA +A P+FK YA+ V ANA AL + L G +V+GGT+NHL+L DLRP TG + E NIT NKN + F GVR+GTPA T+RG + +F +IG+ + Sbjct: 257 DIAKKMNSAVFPGLQGGPLMHVIAAKAVAFGEALKPSFKVYAESVAANAKALASSLKETGLDIVSGGTDNHLMLVDLRPKNATGKRAEAALGRANITCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFGQAEFREIGKLI 396
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_RICCK (Serine hydroxymethyltransferase OS=Rickettsia canadensis (strain McKiel) GN=glyA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 64/136 (47.06%), Postives = 85/136 (62.50%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 441 KIN A+FP LQGGP H + A AVA ++A P +K+Y +QV +NA AL L +GY ++TGGT+NH+VL DLR G+TG D IT NKN + F +S G+R+GTPA T+RG EKDF + + Sbjct: 250 KINSALFPGLQGGPLMHVIAAKAVAFQEALQPKYKSYIQQVISNAEALARILQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNTIPFDKTSPFITSGIRLGTPACTTRGFKEKDFVLVAHMI 385
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_RHOS4 (Serine hydroxymethyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=glyA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 67/140 (47.86%), Postives = 84/140 (60.00%), Query Frame = 1 Query: 37 KINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 453 K+N A+FP +QGGP H + A AVA +A P FKAYA QV NA AL + L G +VTGGT+ HL+L DLRP G+ GN EK +IT NKN + F GVR+GTPA T+RG E +F +IG + V Sbjct: 257 KVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKAYAAQVVKNAQALADELMKGGLDIVTGGTDTHLMLVDLRPKGVKGNATEKALGRAHITCNKNGIPFDPEKPTVTSGVRLGTPAGTTRGFGEAEFREIGRLIVEVV 396
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_PETMO (Serine hydroxymethyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glyA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 71/174 (40.80%), Postives = 101/174 (58.05%), Query Frame = 1 Query: 25 DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEAL 543 D IN +FP +QGGP H + A AVA K+A + FK Y KQV N+ AL N L K +V+GGT+ HL L DL L +TG +EK C+ITVNKN V ++ S G+RIGTPA+T+RG+ E++ ++I + + L+ E G + KD + + KD+ +L Sbjct: 243 DIYKSINKIIFPGIQGGPLEHIIAAKAVAFKEAMSGEFKEYQKQVVRNSKALSNELASKNLRIVSGGTDTHLFLVDLSELNITGKALEKALGQCDITVNKNTVPKETLSPFVTSGIRIGTPAVTTRGMKEEEMKEIASMIAKVANNVLD---EEGNIDKDLAQEI--KKDVVSL 411
BLAST of FC872848 vs. ExPASy Swiss-Prot
Match: GLYA_NATTJ (Serine hydroxymethyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glyA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 70/169 (41.42%), Postives = 103/169 (60.95%), Query Frame = 1 Query: 7 PEGAVY----DFEDKINFAVFPSLQGGPHNHQVGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLK 498 P G V +++ +I+ A+FP LQGGP H + + AV+ ++A + FK Y KQV NA L + L GY LV GG++NHL+L DL+ G+TG K E++ D +ITVNKNAV D G+R+GTPA+T+RG E + +++ + L + +T LE Q+ K K Sbjct: 231 PRGGVVLCKEEYKKEIDKAMFPGLQGGPLMHVIASKAVSFQEALSSEFKNYQKQVIKNASVLADELNNLGYDLVAGGSDNHLMLVDLQKKGVTGKKAERVLDDVHITVNKNAVPNDPEGPFVTSGLRLGTPAVTTRGFAEDEIKEVAQLLDKVIT-GLEDQENLEKCKK 398 The following BLAST results are available for this feature:
BLAST of FC872848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872848 ID=FC872848; Name=FC872848; organism=Citrus clementina; type=EST; length=704bpback to top |