FC872950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: NH2L1_XENLA (NHP2-like protein 1 OS=Xenopus laevis GN=nhp2l1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 428 P A PLA +L+K L LV+ +A +K L++G E K++ RG V+A + P+++I H+P+LCE+ ++PY++V SK+ L A RP V K Sbjct: 8 PKAYPLADAQLTKTLLDLVQQSANYKQLRKGANEATKTLNRGIAEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIK 107
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: NH2L1_RAT (NHP2-like protein 1 OS=Rattus norvegicus GN=Nhp2l1 PE=2 SV=4) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 428 P A PLA L+K L LV+ + +K L++G E K++ RG V+A + P+++I H+P+LCE+ ++PY++V SK+ L A RP V K Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIK 107
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: NH2L1_MOUSE (NHP2-like protein 1 OS=Mus musculus GN=Nhp2l1 PE=2 SV=4) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 428 P A PLA L+K L LV+ + +K L++G E K++ RG V+A + P+++I H+P+LCE+ ++PY++V SK+ L A RP V K Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIK 107
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: NH2L1_MACFA (NHP2-like protein 1 OS=Macaca fascicularis GN=NHP2L1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 428 P A PLA L+K L LV+ + +K L++G E K++ RG V+A + P+++I H+P+LCE+ ++PY++V SK+ L A RP V K Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIK 107
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: NH2L1_HUMAN (NHP2-like protein 1 OS=Homo sapiens GN=NHP2L1 PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 428 P A PLA L+K L LV+ + +K L++G E K++ RG V+A + P+++I H+P+LCE+ ++PY++V SK+ L A RP V K Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIK 107
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: NH2L1_BOVIN (NHP2-like protein 1 OS=Bos taurus GN=NHP2L1 PE=2 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 428 P A PLA L+K L LV+ + +K L++G E K++ RG V+A + P+++I H+P+LCE+ ++PY++V SK+ L A RP V K Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIK 107
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: SNU13_CANGA (13 kDa ribonucleoprotein-associated protein OS=Candida glabrata GN=SNU13 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14 Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 491 P A PLA +KLS+ L +V+ AA + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PY++V S+ L A RP + T Q K K + L+ Sbjct: 6 PKAFPLADEKLSQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKNQIYAVKDKIETLLI 126
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: SNU13_CRYNE (13 kDa ribonucleoprotein-associated protein OS=Cryptococcus neoformans GN=SNU13 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13 Identity = 35/103 (33.98%), Postives = 58/103 (56.31%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTK 437 P A PLA +L+ L L++ A +K LK+G E K++ RG V+ ++ PI+++ H+P+LCE+ ++PY+++ SK L A RP V T + Sbjct: 7 PKAFPLANAQLTNQILDLIQQAQHYKQLKKGANEATKTLNRGICEFIVMTADVEPIEIVLHLPLLCEDKNVPYVFLPSKTALGRACGVSRPVIAASVTTNEAR 109
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: NH2L1_DICDI (NHP2-like protein 1 homolog OS=Dictyostelium discoideum GN=DDB_G0282243 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = 3 Query: 135 AKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRP--TCCVLVLTKPTKGELGQEEQDKLKADYTLVVEDVKEL 512 AKPLA KL+ L L++ + LK+G E K++ R V+A + P++++ H+P+LCE+ +IPY++V+SK +L A RP C V V +++ +LK+ T V + + L Sbjct: 10 AKPLADSKLTLTILDLIQQSNNLGQLKKGANECTKAVSRSTAEFVVLAADAEPLEILLHIPLLCEDKNIPYVFVSSKSELGRACDVSRPVVACAVTV-----------DDKSQLKSQITNVKDSLDRL 126
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: SNU13_KLULA (13 kDa ribonucleoprotein-associated protein OS=Kluyveromyces lactis GN=SNU13 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 38/121 (31.40%), Postives = 63/121 (52.07%), Query Frame = 3 Query: 129 PIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 491 P A PLA LS+ L +V+ A+ + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PY++V S+ L A RP + T Q K K + L+ Sbjct: 6 PKAFPLADATLSQQILDVVQQASNMRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRTALGRACGVSRPVIAASITTNDASAIKSQIYAVKDKIETLLI 126 The following BLAST results are available for this feature:
BLAST of FC872950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872950 ID=FC872950; Name=FC872950; organism=Citrus clementina; type=EST; length=700bpback to top |