FC872950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: RL7A_SULIA (50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.16.27) GN=rpl7Ae PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 36/102 (35.29%), Postives = 56/102 (54.90%), Query Frame = 3 Query: 117 VSLAPIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVL 422 +S A K + L+ L VR A E +K+G E K++ RG L VIA ++ P +++ H+P+LC+E IPY+YV+SK+ L A + T +L Sbjct: 1 MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAIL 102
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: RL7A_SULSO (50S ribosomal protein L7Ae OS=Sulfolobus solfataricus GN=rpl7ae PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 35/102 (34.31%), Postives = 56/102 (54.90%), Query Frame = 3 Query: 117 VSLAPIAKPLAGKKLSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVL 422 +S A K + L+ L VR A E +K+G E K++ RG L +IA ++ P +++ H+P+LC+E IPY+YV+SK+ L A + T +L Sbjct: 1 MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAIL 102
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: RL7A_ARCFU (50S ribosomal protein L7Ae OS=Archaeoglobus fulgidus GN=rpl7ae PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 3 Query: 174 LGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQE 455 L L+ E +K+G E K++ RG L IA ++ P +++ H+P+LCEE ++PYIYV SK DL A + P ++ +GEL +E Sbjct: 16 LSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGIEVPCASAAII---NEGELRKE 106
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: RL7A_PYRCJ (50S ribosomal protein L7Ae OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl7Ae PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 38/115 (33.04%), Postives = 60/115 (52.17%), Query Frame = 3 Query: 135 AKPLAGKK----------LSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLAN-AGATKRPTCCVLVLTKPTKGEL 446 A PL GK +++ L ++ +A + +K+G E K++ RG L +IA ++ P +V+ H+P+LCEE +PY+YV SKE L AG V++ GEL Sbjct: 12 ANPLPGKPFYVRFEVPSDVAEKALEILSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKLGKAAGINVAAAAAVVIEAGQAAGEL 126
BLAST of FC872950 vs. ExPASy Swiss-Prot
Match: RL7A_PICTO (50S ribosomal protein L7Ae OS=Picrophilus torridus GN=rpl7ae PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 159 LSKGTLGLVRLAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDL 374 L K L +V + + +++G EVVKSI RG L VIA ++SP +V+ ++P LCEE +PY+YV K DL Sbjct: 13 LEKAVLDMVENSYKTGKVRKGTNEVVKSIERGESKLVVIAEDVSPAEVVYYLPTLCEERKVPYVYVKKKSDL 84 The following BLAST results are available for this feature:
BLAST of FC872950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872950 ID=FC872950; Name=FC872950; organism=Citrus clementina; type=EST; length=700bpback to top |