FC872958
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX1_RAT (Glutathione peroxidase 1 OS=Rattus norvegicus GN=Gpx1 PE=1 SV=4) HSP 1 Score: 85.5001 bits (210), Expect = 8.993e-18 Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 2
Query: 257 AHATAATEKSLYDFTVKDI-DGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKS 616
A +A + ++Y F+ + + G+ V L +GKVLLI NVAS G T +Y+E++ L ++ +G +L FPCNQFG QE G N EI R F+ F +F+K +VNG P++ L++
Sbjct: 4 ARLSAVAQSTVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTTRDYTEMNDLQKRLGPRGLVVLGFPCNQFGHQENGKNEEILNSLKYVRPGGGFEPNFTLFEKCEVNGEKAHPLFTFLRN 129 HSP 2 Score: 23.8682 bits (50), Expect = 8.993e-18 Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 3
Query: 645 VKWNFEKFLSG 677
+ WNFEKFL G
Sbjct: 158 ISWNFEKFLVG 168
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX3_MACFU (Glutathione peroxidase 3 OS=Macaca fuscata fuscata GN=GPX3 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.165e-17 Identity = 50/119 (42.02%), Postives = 66/119 (55.46%), Query Frame = 2
Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622
++Y++ IDG++ +P ++ GK +L VNVAS GLT Y EL+ L E+ G +L FPCNQFG QEPG N EI R F F +F+K DVNG Y LK+ C
Sbjct: 39 TIYEYGALTIDGEEYIPFKQYIGKYVLFVNVASYUGLT-GQYIELNALQEELAPFGLVLLGFPCNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 1.165e-17 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query: 645 VKWNFEKFLSG 677
++WNFEKFL G
Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX5_RAT (Epididymal secretory glutathione peroxidase OS=Rattus norvegicus GN=Gpx5 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.516e-17 Identity = 49/119 (41.18%), Postives = 66/119 (55.46%), Query Frame = 2
Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622
++Y++ ++GK+ +P ++ GK +L VNVA+ CGLT Y EL+ L + K G IL FPCNQFG QEPG N EI R F F +F K DVNG ++ LK C
Sbjct: 39 TIYNYEALSLNGKERIPFKQYAGKHVLFVNVATYCGLT-IQYPELNALQDDLKQFGLVILGFPCNQFGKQEPGDNTEILPGLKYVRPGKGFLPNFQLFAKGDVNGEKEQEIFTFLKRSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 1.516e-17 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query: 645 VKWNFEKFLSG 677
++WNFEKFL G
Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX5_PIG (Epididymal secretory glutathione peroxidase OS=Sus scrofa GN=GPX5 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.563e-17 Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 2
Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622
++YD+ ++G + + ++ GK +L VNVA+ CGLT + Y EL+ L E+ K G +L FPCNQFG QEPG N EI R + F +F+K DVNG V+ LK C
Sbjct: 37 TIYDYDAFTLNGNEHIQFKQYAGKHVLFVNVATYCGLT-AQYPELNTLQEELKPFGLVVLGFPCNQFGKQEPGENSEILLGLKYVRPGGGYVPNFQLFEKGDVNGEKEQKVFTFLKHSC 154 HSP 2 Score: 24.6386 bits (52), Expect = 2.563e-17 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query: 645 VKWNFEKFLSG 677
++WNFEKFL G
Sbjct: 177 IRWNFEKFLVG 187
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX5_HUMAN (Epididymal secretory glutathione peroxidase OS=Homo sapiens GN=GPX5 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.332e-17 Identity = 49/119 (41.18%), Postives = 66/119 (55.46%), Query Frame = 2
Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622
++YD+ ++ + V ++ GK +L VNVA+ CGLT + Y EL+ L E+ K G +L FPCNQFG QEPG N EI R F F +F+K DVNG V+ LK C
Sbjct: 39 TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLT-AQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 3.332e-17 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query: 645 VKWNFEKFLSG 677
++WNFEKFL G
Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX1_PONPY (Glutathione peroxidase 1 OS=Pongo pygmaeus GN=GPX1 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.345e-17 Identity = 47/125 (37.60%), Postives = 69/125 (55.20%), Query Frame = 2
Query: 257 AHATAATEKSLYDFTVKDI-DGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLK 613
A AA +S+Y F+ + + G+ V L +GKVLLI NVAS G T +Y++++ L + +G +L FPCNQFG QE N EI R F+ F +F+K +VNG P++ L+
Sbjct: 4 ARLVAAAAQSVYSFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLR 128 HSP 2 Score: 23.8682 bits (50), Expect = 4.345e-17 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 3
Query: 645 VKWNFEKFLSG 677
V WNFEKFL G
Sbjct: 158 VAWNFEKFLVG 168
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX3_MOUSE (Glutathione peroxidase 3 OS=Mus musculus GN=Gpx3 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 5.627e-17 Identity = 50/119 (42.02%), Postives = 65/119 (54.62%), Query Frame = 2
Query: 284 SLYDFTVKDIDGKD-VPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLKSKC 622
++Y++ IDG++ +P ++ GK +L VNVAS GLT Y EL+ L E+ G IL FP NQFG QEPG N EI R F F +F+K DVNG Y LK+ C
Sbjct: 39 TIYEYGALTIDGEEYIPFKQYAGKYILFVNVASYUGLT-DQYLELNALQEELGPFGLVILGFPSNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSC 156 HSP 2 Score: 24.6386 bits (52), Expect = 5.627e-17 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query: 645 VKWNFEKFLSG 677
++WNFEKFL G
Sbjct: 179 IRWNFEKFLVG 189
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX1_PIG (Glutathione peroxidase 1 OS=Sus scrofa GN=GPX1 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 7.340e-17 Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 2
Query: 257 AHATAATEKSLYDFTVKDI-DGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTR-------FKAEFPIFDKVDVNGPNTAPVYQLLK 613
A A +S+Y F+ + + G+ + L +GKVLLI NVAS G T +Y++++ L + +G +L FPCNQFG QE N EI C + F+ F +F+K +VNG N P++ L+
Sbjct: 9 AALAAVAPRSVYAFSARPLAGGEPISLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNGEI--LNCLKYVRPGGGFEPNFMLFEKCEVNGANAHPLFAFLR 133 HSP 2 Score: 23.483 bits (49), Expect = 7.340e-17 Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 3
Query: 645 VKWNFEKFLSG 677
+ WNFEKFL G
Sbjct: 163 IAWNFEKFLVG 173
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX1_MACFU (Glutathione peroxidase 1 OS=Macaca fuscata fuscata GN=GPX1 PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 7.343e-17 Identity = 47/125 (37.60%), Postives = 69/125 (55.20%), Query Frame = 2
Query: 257 AHATAATEKSLYDFTVKDI-DGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLK 613
A AA +S+Y F+ + + G+ V L +GKVLLI NVAS G T +Y++++ L + +G +L FPCNQFG QE N EI R F+ F +F+K +VNG P++ L+
Sbjct: 4 ARLAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLR 128 HSP 2 Score: 23.8682 bits (50), Expect = 7.343e-17 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 3
Query: 645 VKWNFEKFLSG 677
V WNFEKFL G
Sbjct: 158 VAWNFEKFLVG 168
BLAST of FC872958 vs. ExPASy Swiss-Prot
Match: GPX1_HUMAN (Glutathione peroxidase 1 OS=Homo sapiens GN=GPX1 PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 7.343e-17 Identity = 47/125 (37.60%), Postives = 69/125 (55.20%), Query Frame = 2
Query: 257 AHATAATEKSLYDFTVKDI-DGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEI-KEFACTR----FKAEFPIFDKVDVNGPNTAPVYQLLK 613
A AA +S+Y F+ + + G+ V L +GKVLLI NVAS G T +Y++++ L + +G +L FPCNQFG QE N EI R F+ F +F+K +VNG P++ L+
Sbjct: 4 ARLAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLR 128 HSP 2 Score: 23.8682 bits (50), Expect = 7.343e-17 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 3
Query: 645 VKWNFEKFLSG 677
V WNFEKFL G
Sbjct: 158 VAWNFEKFLVG 168 The following BLAST results are available for this feature:
BLAST of FC872958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872958 ID=FC872958; Name=FC872958; organism=Citrus clementina; type=EST; length=678bpback to top |