FC872959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_THENV (30S ribosomal protein S10P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps10p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 33/98 (33.67%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 K+RI L N ++++V ++V AK ++V+GP+ +PT+ L +T R++P G+G +T+D +E+R+ KR+ID+ +S V++++ +I + V++E+ + Sbjct: 8 KVRIRLYGTNPTDVDQVAREIVDLAKKMGVQVRGPIPLPTRRLMVTVRRAPSGQGYHTFDHWEMRISKRLIDIEASERVLRRLMTIRVPDTVKIELQL 105
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_PYRAR (30S ribosomal protein S10P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps10p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 33/98 (33.67%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 K+RI L N ++++V ++V AK ++V+GP+ +PT+ L +T R++P G+G +T+D +E+R+ KR+ID+ +S V++++ +I + V++E+ + Sbjct: 8 KVRIRLYGTNPADVDQVAREIVDLAKKMGVQVRGPIPLPTRRLVVTVRRAPSGQGYHTYDHWEMRISKRLIDIEASERVLRRLMTIRVPDTVKIELQL 105
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_METB6 (30S ribosomal protein S10P OS=Methanoregula boonei (strain 6A8) GN=rps10p PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12 Identity = 35/100 (35.00%), Postives = 61/100 (61.00%), Query Frame = 3 Query: 150 IHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 + K RI L+ + +E VC + A+ + + GP+ +PTK L + RKSP GEGT T+DR+++RVHKR+ID+ + ++Q+ I + + +E+ + Sbjct: 1 MQKARIRLTGTDFNKVETVCDRIREIAERTGVNLAGPIPLPTKRLVVPIRKSPDGEGTATFDRWQMRVHKRLIDIDADERALRQLMRIQVPKDIGIEIVL 100
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_SULSO (30S ribosomal protein S10P OS=Sulfolobus solfataricus GN=rps10p PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKR-LRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 K RI L S NV+NL V T +RG +K + ++GP+ +PT L + + P GEG W+++E+RVHKR+ID+ + V++Q+ + + V +E+ + Sbjct: 4 KARIRLWSTNVENLNYVITQ-IRGIVEKTGIEMRGPIPLPTSKLEVPIMRLPHGEGRKKWEKWEMRVHKRLIDIAADERVMRQLMRVRVPEDVYIEIQL 101
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_SULIY (30S ribosomal protein S10P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rps10p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKR-LRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 K RI L S NV+NL V T +RG +K + ++GP+ +PT L + + P GEG W+++E+RVHKR+ID+ + V++Q+ + + V +E+ + Sbjct: 4 KARIRLWSTNVENLNYVITQ-IRGIVEKTGIEMRGPIPLPTSKLEVPIMRLPHGEGRKKWEKWEMRVHKRLIDIAADERVMRQLMRVRVPEDVYIEIQL 101
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_SULIN (30S ribosomal protein S10P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps10p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKR-LRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 K RI L S NV+NL V T +RG +K + ++GP+ +PT L + + P GEG W+++E+RVHKR+ID+ + V++Q+ + + V +E+ + Sbjct: 4 KARIRLWSTNVENLNYVITQ-IRGIVEKTGIEMRGPIPLPTSKLEVPIMRLPHGEGRKKWEKWEMRVHKRLIDIAADERVMRQLMRVRVPEDVYIEIQL 101
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_SULIM (30S ribosomal protein S10P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rps10p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKR-LRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 K RI L S NV+NL V T +RG +K + ++GP+ +PT L + + P GEG W+++E+RVHKR+ID+ + V++Q+ + + V +E+ + Sbjct: 4 KARIRLWSTNVENLNYVITQ-IRGIVEKTGIEMRGPIPLPTSKLEVPIMRLPHGEGRKKWEKWEMRVHKRLIDIAADERVMRQLMRVRVPEDVYIEIQL 101
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_SULIL (30S ribosomal protein S10P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rps10p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKR-LRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 K RI L S NV+NL V T +RG +K + ++GP+ +PT L + + P GEG W+++E+RVHKR+ID+ + V++Q+ + + V +E+ + Sbjct: 4 KARIRLWSTNVENLNYVITQ-IRGIVEKTGIEMRGPIPLPTSKLEVPIMRLPHGEGRKKWEKWEMRVHKRLIDIAADERVMRQLMRVRVPEDVYIEIQL 101
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_SULIK (30S ribosomal protein S10P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps10p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKR-LRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 K RI L S NV+NL V T +RG +K + ++GP+ +PT L + + P GEG W+++E+RVHKR+ID+ + V++Q+ + + V +E+ + Sbjct: 4 KARIRLWSTNVENLNYVITQ-IRGIVEKTGIEMRGPIPLPTSKLEVPIMRLPHGEGRKKWEKWEMRVHKRLIDIAADERVMRQLMRVRVPEDVYIEIQL 101
BLAST of FC872959 vs. ExPASy Swiss-Prot
Match: RS10_SULIA (30S ribosomal protein S10P OS=Sulfolobus islandicus (strain M.16.27) GN=rps10p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 156 KIRITLSSKNVKNLEKVCTDLVRGAKDKR-LRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTI 449 K RI L S NV+NL V T +RG +K + ++GP+ +PT L + + P GEG W+++E+RVHKR+ID+ + V++Q+ + + V +E+ + Sbjct: 4 KARIRLWSTNVENLNYVITQ-IRGIVEKTGIEMRGPIPLPTSKLEVPIMRLPHGEGRKKWEKWEMRVHKRLIDIAADERVMRQLMRVRVPEDVYIEIQL 101 The following BLAST results are available for this feature:
BLAST of FC872959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872959 ID=FC872959; Name=FC872959; organism=Citrus clementina; type=EST; length=765bpback to top |