FC872980

Overview
NameFC872980
Unique NameFC872980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length860
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14945 contig Ccv1_Contig14945:219..1078. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.664e-20
Identity = 66/235 (28.09%), Postives = 119/235 (50.64%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE---SEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE-EQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            +FR ++D LS++NH + ++L+G+C  EE   R++V+E+  +G+L  H+H K     E LDW  R+ IA+  A  +E++H    PP+ H  + SS + + E++ A+++D            S   E+    +                 +VY+FGVLL E+++GR  +    + G++ +WA   +     +   +DP L    E E L+++  +   CVR   + RP+M  +   L
Sbjct:  554 EFRTELDLLSRLNHAHLLSLLGYC--EECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHYEEGNIVEWAVPLIK-AGDINALLDPVLKHPSEIEALKRIVSVACKCVRMRGKDRPSMDKVTTAL 785          
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.664e-20
Identity = 68/224 (30.36%), Postives = 114/224 (50.89%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYL--VDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            +F  +++ L  + H N VNL+G+  E     R++V+EY P+GTL +H+H   S  L W +R++IAM  A  LE++H +  P I H  + SS V L  ++ A+++D           +                 +VY+FGV+L E++TGR  Y    D   + +W    +   +     VD  ++   + E L KL ++ + CVR DP ++PTM ++A  L  +
Sbjct:  562 EFETELEILCNIRHCNIVNLLGYSTEMGE--RLLVYEYMPHGTLHDHLHSGFSP-LSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSEWVARVADFGLVTSSNEKNLDIKR-------------DVYDFGVVLLEILTGRKRYDRDCDPPEIVEWTVPVIREGKAAA-IVDTYIALPRNVEPLLKLADVAELCVREDPNQQPTMSELANWLEHV 768          
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.786e-20
Identity = 64/231 (27.71%), Postives = 110/231 (47.62%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY---LVDNG-SLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            F ++++ L  + H+  VNL G+C    P +++++++Y P G+L E +H +  E LDW  R+ I +G A  L ++H   +P I H  + SS + L  +  A++SD           S    I                      +VY+FGVL+ E+++G+ P     ++ G ++  W    +S  +P +  VDP       E L+ L  +   CV   PE+RPTM  +  +L
Sbjct:  347 FERELEILGSIKHRYLVNLRGYCNS--PTSKLLLYDYLPGGSLDEALH-ERGEQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRP-RDIVDPNCEGMQMESLDALLSIATQCVSPSPEERPTMHRVVQLL 573          
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.251e-20
Identity = 70/234 (29.91%), Postives = 120/234 (51.28%), Query Frame = 3
Query:   60 KNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY-LVDNGSLEDWAADYLSGVQ--PLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDI 713
            +NLE +F  +I  LS++NH+N V ++G C E E    ++V+E+ PN  LF+H+H   E   + W +RL IA  +A  L ++H  ++ PI H  + S+ + L E + AK+SD      +A+ +          +                 +VY+FGVLL E++TG  P  L+    +    A +L  ++   L + +D  +    D E++  + +L + C+  + E RPTMRD+
Sbjct:  426 ENLE-EFINEIILLSQINHRNVVKILGCCLETE--VPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVRMLGAYFLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTMRDV 656          
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.251e-20
Identity = 62/240 (25.83%), Postives = 114/240 (47.50%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE-HLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL-------------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLED-----WAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            +F  ++ TLS + H N V L  FC      ++++V+EY PNG+L+E +H +  E  + W +R  +A+G A  LE++H  L+ P+ H  + SS + L E++  +++D               F   +    +                 +VY+FGV+L E+VTG+ P   D G   D     W+    +  + + + +D ++    +E   K+  +   C    P+ RP M+ + ++L +I
Sbjct:  729 EFEAEVATLSNIKHINVVKL--FCSITCEDSKLLVYEYMPNGSLWEQLHERRGEQEIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYKEDALKVLTIALLCTDKSPQARPFMKSVVSMLEKI 966          
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.066e-19
Identity = 69/238 (28.99%), Postives = 108/238 (45.38%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEE--EEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNE-----------IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY----LVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            Q+  ++  L  VNH N V LIG+C E  E    R++V+EY  N +L +H+  + S  L W  RL I +G A  L ++H L   + +    SS V L + +  KLSD     E             +                    +VY+FGV+L+E++TGR        V    L DW  +Y +  Q     VDP L +++       L +L   C++ + ++RPTM  +   L++I
Sbjct:  133 QWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHTLPWKKRLEIMLGAAEGLTYLHDLK--VIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVVERLKKI 368          
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.392e-19
Identity = 66/243 (27.16%), Postives = 117/243 (48.15%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLD-WGMRLRIAMGMAYCLEHMHQLN-PPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLE-DWAADYL---SGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 752
            +F  ++  LS++NH++ V L+G C E E    ++V+E+ PNG LF+H+H +  ++   WG+R+RIA+ ++    ++H     PI H  + S+ + L E Y AK+SD           + W  +    +                 +VY+FGV+L E++TG  P +  + + E    ADY         L + +D  + +    EQ+  +  L   C++   + RP MR+++  L  I     D
Sbjct:  494 EFINEVIILSQINHRHVVKLLGCCLETE--VPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEIIDARIRNDCKLEQVIAVANLALRCLKKTGKTRPDMREVSTALERICSAPED 734          
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.392e-19
Identity = 72/263 (27.38%), Postives = 118/263 (44.87%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL------DWGMRLRIAMGMAYCLEHMHQLN-PPIAHNYLNSSAVHLTEDYAAKLSD--LSFWNEI-------------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLED-------WAADY---LSGVQPLQQFVDPTLSS---FDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 752
            E  F  +I  LS+++HK+ V L+G+CEE E   +++V++Y  NG L++H+H K +          W MR++IA+  A  +E++H    PPI H  + SS + L  ++ A++SD  LS    +             A   +                 +VY  GV+L E++TG+     +NG +E+          DY         L   +DP + S    + + +E +      CV A+   RPTM DI   L     +  D
Sbjct:  539 ETAFDSEIAFLSRLHHKHLVRLVGYCEERE--EKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGKRAIFRNNGDVEEEEGCVPVHLVDYSVPAITADELSTILDPRVGSPELGEGDAVELVAYTAMHCVNAEGRNRPTMTDIVGNLERALDLCGD 799          
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.819e-19
Identity = 60/239 (25.10%), Postives = 112/239 (46.86%), Query Frame = 3
Query:   87 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG----SLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDG 755
            +++ L +++H N V L+G+C E E   R++V+E+ P G+L  H+  + ++ L W +R+++A+G A  L  +H+    + +    ++ + L  D+ AKLSD            +  +   +                    +VY+FGV+L E+++GR      NG    SL DWA  YL   + L + +D  L   + ++       L   C+  D + RP M ++   L ++  +   G
Sbjct:  140 EVNYLGQLSHPNLVLLVGYCAEGE--NRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLEQLESVAKPG 376          
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.375e-19
Identity = 64/242 (26.45%), Postives = 114/242 (47.11%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE----EQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 752
            +F  ++  LS++NH+N V L+G C E E    ++V+E+ PNG LF+ +H    ++ + W +RLRI++ +A  L ++H   + P+ H  + ++ + L E Y AK+SD      I + +                            +VY+FGV+L E++TG  P+ V           + +      + +D   S   E    EQ+  + +L + C+    +KRP MR+++  L  I     D
Sbjct:  461 EFINEVGVLSQINHRNIVKLMGCCLETE--VPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREVSVELERIRSSPED 700          
The following BLAST results are available for this feature:
BLAST of FC872980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
ACR4_ARATH3.664e-2028.09Serine/threonine-protein kinase-like protein ACR4 ... [more]
ACCR1_ARATH3.664e-2030.36Serine/threonine-protein kinase-like protein CCR1 ... [more]
FEI1_ARATH4.786e-2027.71LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLG_ARATH6.251e-2029.91Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
IKU2_ARATH6.251e-2025.83Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
Y5707_ARATH1.066e-1928.99Probable receptor-like protein kinase At5g47070 OS... [more]
WAKLL_ARATH1.392e-1927.16Putative wall-associated receptor kinase-like 13 O... [more]
ACCR3_ARATH1.392e-1927.38Putative serine/threonine-protein kinase-like prot... [more]
APK2A_ARATH1.819e-1925.10Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
WAKLI_ARATH2.375e-1926.45Wall-associated receptor kinase-like 22 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev Citrus clementina cDNA clone KN0AAI2BB02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872980 ID=FC872980; Name=FC872980; organism=Citrus clementina; type=EST; length=860bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACCGAGGGCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAAT
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