FC873025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans GN=ispG PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.073e-34 Identity = 69/144 (47.92%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCK 753 RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +YTD EY +ELE I EVFSPLV +CK Sbjct: 14 RRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEIVRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDYTDLEYNQELERISEVFSPLVLRCK 156
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_AKKM8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=ispG PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33 Identity = 68/156 (43.59%), Postives = 103/156 (66.03%), Query Frame = 1 Query: 286 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCK 753 + YC S ++ RR TR VMVGNV +G +PIR+Q+M T+DT+D V+E + +A+ G +++R+T Q K A I L ++PLVADIHF P A+ A+ +KIR+NPGNF D++ +F+ EY+D EY++EL+ ++E F+PLV C+ Sbjct: 2 QSSYCPSPYRYTRRVTREVMVGNVGVGGSNPIRIQSMLTSDTRDTDACVKEALELAEAGCEIIRLTAQTKAYAANLENIARELRAAGCHVPLVADIHFKPDAAMEAAKWVEKIRINPGNFVDKK-KFEVREYSDAEYREELDRLKEEFTPLVLFCR 156
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ispG PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.349e-33 Identity = 68/144 (47.22%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCK 753 RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +YTD +Y +ELE I EVFSPLV +CK Sbjct: 14 RRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEIVRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDYTDLKYNQELERISEVFSPLVLRCK 156
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBL (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ispG PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.068e-33 Identity = 69/144 (47.92%), Postives = 98/144 (68.06%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCK 753 RR+TR V VG+V IG +PI +Q+M +DT D GTV++++ + G ++VR TV + +AD I+ L + IPLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +YTD EY +ELE I +FSPLV +CK Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTKGTVKQILELERTGCEIVRFTVPSQVDADNLPSIRQELKKAGSKIPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDYTDSEYDEELERISAIFSPLVLRCK 156
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBJ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ispG PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.834e-33 Identity = 69/144 (47.92%), Postives = 97/144 (67.36%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCK 753 RR+TR V VG+V IG +PI +Q+M +DT D GTV++++ + G ++VR TV + +AD I+ L + IPLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +YTD EY +ELE I FSPLV +CK Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTKGTVKQILELERTGCEIVRFTVPSQVDADNLPSIRQELKKAGSKIPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDYTDSEYDEELERISATFSPLVLRCK 156
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_BACTN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides thetaiotaomicron GN=ispG PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.861e-30 Identity = 63/144 (43.75%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCK 753 RR+T V +G V +G +PIR+Q+MT T D VE+ RI D G + VR+T QG +EA+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEYTD+EY +E++ I + F P + CK Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTSTMDTEACVEQAKRIVDAGGEYVRLTTQGVKEAENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEYTDEEYAQEIQKIHDRFVPFLNICK 151
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_BACFR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis GN=ispG PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.175e-30 Identity = 64/144 (44.44%), Postives = 89/144 (61.81%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCK 753 RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I L Y +PLVAD+HF+P VA A+ +K+R+NPGN+ D F+QLEYTD+EY EL+ I + F P + CK Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKEAENLMNINIGLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEYTDEEYAAELQKIRDRFVPFLNICK 151
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_BACFN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=ispG PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.072e-30 Identity = 64/144 (44.44%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCK 753 RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I L Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+QLEYTD+EY EL+ I + F P + CK Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKEAENLMNINIGLRSTGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEYTDEEYAAELQKIRDRFVPFLNICK 151
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_PARD8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ispG PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.575e-29 Identity = 63/144 (43.75%), Postives = 87/144 (60.42%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCK 753 RRK+ +G+ +G E+PIR+Q+M T D V + +R+ + GA+ VR T QG+REA EI+ L ++ Y PLVADIHF P A A +K+R+NPGN+ D+ F LEYTD+EY E+E I E F P + CK Sbjct: 8 RRKSSVAQIGDTPMGGENPIRIQSMANVSTMDTEAAVAQAIRMIEAGAEYVRFTAQGEREARNLGEIRKQLNEQGYTTPLVADIHFNPRAADAAAGEVEKVRINPGNYVDKVKTFSHLEYTDEEYAAEIEKIRERFVPFLNICK 151
BLAST of FC873025 vs. ExPASy Swiss-Prot
Match: ISPG_BACV8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=ispG PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.687e-29 Identity = 64/144 (44.44%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 322 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFQQLEYTDDEYQKELEHIEEVFSPLVEKCK 753 RR++ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG REA+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D FQ+LEYTD+EY +E+E I F P + CK Sbjct: 8 RRESSEVNIGATPLGGNNPIRIQSMTNTVTMDTEACVEQAKRIIDAGGEYVRLTTQGVREAENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFQKLEYTDEEYAQEIEKIRARFIPFLNICK 151 The following BLAST results are available for this feature:
BLAST of FC873025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873025 ID=FC873025; Name=FC873025; organism=Citrus clementina; type=EST; length=755bpback to top |