FC873039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.914e-53 Identity = 117/189 (61.90%), Postives = 128/189 (67.72%), Query Frame = 3 Query: 291 MDRQGHGGQPTSMGLVGSGAQVPYGTNPYQQNQMAGGPNPGPAVTSVGAIQSTSQPGGXXXXXXXXXXXXXXXXXXXXXXXXXXSFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEV 857 MD+Q HG SGA + YGTNPYQ N M+ T+ +QPG +FW NQ++EIEK DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEV Sbjct: 1 MDQQDHGQ---------SGA-MNYGTNPYQTNPMS--------TTAATVAGGAAQPG------QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEV 165
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.055e-51 Identity = 109/175 (62.29%), Postives = 118/175 (67.43%), Query Frame = 3 Query: 339 GSGAQVPYGTNPYQQNQMAGGPNPG--PAVTSVGAIQSTSQPGGXXXXXXXXXXXXXXXXXXXXXXXXXXSFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEV 857 G + + YG+NPYQ N M P PA + Q SFW Q++EIEK DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEV Sbjct: 5 GQSSAMNYGSNPYQTNAMTTTPTGSDHPAYHQIHQQQQQQ------------------------LTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEV 155
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=1 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 2.266e-46 Identity = 89/103 (86.41%), Postives = 98/103 (95.15%), Query Frame = 3 Query: 546 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDE 854 FWANQ QEIE DFKNH+LPLARIKKIMKADEDVRMISAEAPVIFA+ACEMFILELTLR+W HTEENKRRTLQKNDIAAAI+RTD+FDFLVDI+PR++LK+E Sbjct: 58 FWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE 160
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.593e-46 Identity = 88/103 (85.44%), Postives = 97/103 (94.17%), Query Frame = 3 Query: 546 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDE 854 FW Q QEIE+VNDFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+++KDE Sbjct: 47 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE 149
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 8.611e-46 Identity = 88/103 (85.44%), Postives = 97/103 (94.17%), Query Frame = 3 Query: 546 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDE 854 FW Q QEIE+VNDFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE++K+E Sbjct: 60 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEE 162
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC_RAT (Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus GN=Nfyc PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.200e-33 Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 543 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLK 848 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI ELTLR+W HTE+NKRRTLQ+NDIA AIT+ D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC_PONAB (Nuclear transcription factor Y subunit gamma OS=Pongo abelii GN=NFYC PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.200e-33 Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 543 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLK 848 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI ELTLR+W HTE+NKRRTLQ+NDIA AIT+ D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC_MOUSE (Nuclear transcription factor Y subunit gamma OS=Mus musculus GN=Nfyc PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 2.200e-33 Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 543 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLK 848 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI ELTLR+W HTE+NKRRTLQ+NDIA AIT+ D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC_HUMAN (Nuclear transcription factor Y subunit gamma OS=Homo sapiens GN=NFYC PE=1 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 2.200e-33 Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 543 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLK 848 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI ELTLR+W HTE+NKRRTLQ+NDIA AIT+ D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC_BOVIN (Nuclear transcription factor Y subunit gamma OS=Bos taurus GN=NFYC PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.200e-33 Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 543 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLK 848 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI ELTLR+W HTE+NKRRTLQ+NDIA AIT+ D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124 The following BLAST results are available for this feature:
BLAST of FC873039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873039 ID=FC873039; Name=FC873039; organism=Citrus clementina; type=EST; length=859bpback to top |