FC873039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC_DICDI (Nuclear transcription factor Y subunit gamma OS=Dictyostelium discoideum GN=nfyc-1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.092e-32 Identity = 62/102 (60.78%), Postives = 85/102 (83.33%), Query Frame = 3 Query: 543 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLK 848 SFW++Q ++I K DFK H LPLARIKKIMK+D+DV IS+EAP++FA+ACE+ ILE+T RSW HTE NKRRTLQ+ DI +++R + FDFL+D++PR+++K Sbjct: 251 SFWSSQLRDIHKTEDFKTHELPLARIKKIMKSDKDVNKISSEAPILFAKACEILILEMTHRSWVHTEMNKRRTLQRTDIINSLSRCETFDFLIDMLPRDEIK 352
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: HAP5_YEAST (Transcriptional activator HAP5 OS=Saccharomyces cerevisiae GN=HAP5 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.587e-31 Identity = 65/108 (60.19%), Postives = 81/108 (75.00%), Query Frame = 3 Query: 546 FWANQYQEIEKVN--------DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL 845 +W EIE N DFK+HSLP ARI+K+MK DEDV+MISAEAP+IFA+ACE+FI ELT+R+W E NKRRTLQK DIA A+ ++D+FDFL+D+VPR L Sbjct: 133 YWQELINEIESTNEPGSEHQDDFKSHSLPFARIRKVMKTDEDVKMISAEAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADIAEALQKSDMFDFLIDVVPRRPL 240
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC6_ARATH (Nuclear transcription factor Y subunit C-6 OS=Arabidopsis thaliana GN=NFYC6 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.130e-29 Identity = 61/100 (61.00%), Postives = 81/100 (81.00%), Query Frame = 3 Query: 543 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRED 842 ++W Q +E V+DFKN LPLARIKKIMKAD DV M+SAEAP+IFA+ACEMFI++LT+RSW EENKR TLQK+DI+ A+ + +DFL+D+VP+++ Sbjct: 38 NYWIEQ---METVSDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVPKDE 134
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC8_ARATH (Nuclear transcription factor Y subunit C-8 OS=Arabidopsis thaliana GN=NFYC8 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.898e-26 Identity = 55/94 (58.51%), Postives = 76/94 (80.85%), Query Frame = 3 Query: 543 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVD 824 SFW+ +E+E DFKNH LP+ RIKKIMK D DV MI++EAP++ ++ACEMFI++LT+RSW H +E+KR TLQK+++ AA+ +T IFDFL+D Sbjct: 20 SFWS---KEMEGNLDFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNVDAAVAQTVIFDFLLD 110
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC5_ARATH (Nuclear transcription factor Y subunit C-5 OS=Arabidopsis thaliana GN=NFYC5 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.338e-22 Identity = 49/100 (49.00%), Postives = 76/100 (76.00%), Query Frame = 3 Query: 543 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRED 842 SFW+ + +E + KNH P++RIK+IMK D DV MI+AEAP + ++ACEMF+++LT+RSW H +E+ R T++K+D+ A +++T IFDFL D VP+++ Sbjct: 20 SFWS---KGMEGDLNVKNHEFPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTMRSWLHAQESNRLTIRKSDVDAVVSQTVIFDFLRDDVPKDE 116
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: HAP5_SCHPO (Transcriptional activator hap5 OS=Schizosaccharomyces pombe GN=hap5 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.671e-22 Identity = 49/102 (48.04%), Postives = 77/102 (75.49%), Query Frame = 3 Query: 546 FWANQYQEIEKVND-FKNHSLPLARIKKIMKADEDVR--MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRED 842 +W +E + K LPLARIKK+MK D+DV+ MISAEAP +FA+ E+FI ELT+R+W H ++N+RRTLQ++DIA A+++++++DFL+DI+ +++ Sbjct: 89 YWQKTIDTLEHDDQAVKTLHLPLARIKKVMKTDDDVKNKMISAEAPFLFAKGSEIFIAELTMRAWLHAKKNQRRTLQRSDIANAVSKSEMYDFLIDIISKDN 190
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYC7_ARATH (Nuclear transcription factor Y subunit C-7 OS=Arabidopsis thaliana GN=NFYC7 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.587e-21 Identity = 51/105 (48.57%), Postives = 74/105 (70.48%), Query Frame = 3 Query: 543 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQ------KNDIAAAITRTDIFDFLVDIVPRE 839 ++W Q + D K+H+ PL RIKKIMK++ +V M++AEAPV+ ++ACEM IL+LT+RSW HT E R+TL+ ++DI+AA TR+ F FL D+VPR+ Sbjct: 47 NYWIAQ---MGNATDVKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLTMRSWLHTVEGGRQTLKRSDTLTRSDISAATTRSFKFTFLGDVVPRD 148
BLAST of FC873039 vs. ExPASy Swiss-Prot
Match: NFYCA_ARATH (Nuclear transcription factor Y subunit C-10 OS=Arabidopsis thaliana GN=NFYC10 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.453e-18 Identity = 43/97 (44.33%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 546 FWANQYQEIEKVNDFKNHS-LPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 833 FW NQ E++ +F + LPL+R++KI+K+D +V+ IS + P +F++ACE FILE+TLR+W HT+ R T+++ DI A+ + +DFL+D VP Sbjct: 51 FWNNQR---EQLGNFAGQTHLPLSRVRKILKSDPEVKKISCDVPALFSKACEYFILEVTLRAWMHTQSCTRETIRRCDIFQAVKNSGTYDFLIDRVP 144 The following BLAST results are available for this feature:
BLAST of FC873039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873039 ID=FC873039; Name=FC873039; organism=Citrus clementina; type=EST; length=859bpback to top |