FC873045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873045 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 36/57 (63.16%), Postives = 41/57 (71.93%), Query Frame = 3 Query: 9 TIGKYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWGMFITTCKRLRIMRGSEAKGLA 179 T GK E +Y TYEDKDGDWMLVGDVPW MF +C+RLRIM+GS+A GLA Sbjct: 190 TTGKDGLSESRKDGEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLA 246
BLAST of FC873045 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.884e-14 Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 3 Query: 45 GSDYAPTYEDKDGDWMLVGDVPWGMFITTCKRLRIMRGSEAKGLA 179 G++Y PTYEDKDGDWMLVGDVPW MF+ +CKR+R+M+ SEA L+ Sbjct: 143 GAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLS 187
BLAST of FC873045 vs. ExPASy Swiss-Prot
Match: IAA31_ORYSJ (Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica GN=IAA31 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.460e-14 Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 3 Query: 42 NGSDYAPTYEDKDGDWMLVGDVPWGMFITTCKRLRIMRGSEAKGL 176 N SD+A TYEDKDGD MLVGDVP+ MFI+TCKRLRIM+GSEA+GL Sbjct: 148 NPSDFAVTYEDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGL 192
BLAST of FC873045 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.460e-14 Identity = 40/71 (56.34%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 9 TIGKYSE-----REGYN---------GSDYAPTYEDKDGDWMLVGDVPWGMFITTCKRLRIMRGSEAKGLA 179 TIG++ R+G N GS+Y TYEDKD DWMLVGDVPW MFI +CK+LRIM+ SEA GLA Sbjct: 224 TIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLA 294
BLAST of FC873045 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.349e-14 Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 33 EGYNGSDYAPTYEDKDGDWMLVGDVPWGMFITTCKRLRIMRGSEAKGLA 179 E +Y TYEDKDGDWMLVGDVPW MF +C+RLRIM+GS+A GLA Sbjct: 204 ENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLA 252
BLAST of FC873045 vs. ExPASy Swiss-Prot
Match: IAA26_ORYSJ (Auxin-responsive protein IAA26 OS=Oryza sativa subsp. japonica GN=IAA26 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.595e-13 Identity = 30/49 (61.22%), Postives = 40/49 (81.63%), Query Frame = 3 Query: 33 EGYNGSDYAPTYEDKDGDWMLVGDVPWGMFITTCKRLRIMRGSEAKGLA 179 +GY ++A YED DGDWMLVGDVPW MF+++CKR+R+MR EA+GL+ Sbjct: 89 DGYGEWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLS 137
BLAST of FC873045 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.595e-13 Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 3 Query: 42 NGSDYAPTYEDKDGDWMLVGDVPWGMFITTCKRLRIMRGSEAKG 173 + S++ P YEDKDGDWMLVGDVPW MF+ +CKRLRIM+ S+AKG Sbjct: 134 DNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKSDAKG 177
BLAST of FC873045 vs. ExPASy Swiss-Prot
Match: IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.720e-13 Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 3 Query: 51 DYAPTYEDKDGDWMLVGDVPWGMFITTCKRLRIMRGSEAKG 173 ++ P YEDKDGDWMLVGDVPW MFI +CKRLRIM+ S+AKG Sbjct: 126 EHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKG 166
BLAST of FC873045 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.553e-13 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 3 Query: 42 NGSDYAPTYEDKDGDWMLVGDVPWGMFITTCKRLRIMRGSEAKGLA 179 NG++ TYEDKD DWMLVGDVPW MF +C+RLRIM+GS+A GLA Sbjct: 210 NGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLA 255
BLAST of FC873045 vs. ExPASy Swiss-Prot
Match: IAA19_ORYSJ (Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica GN=IAA19 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.553e-13 Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 3 Query: 24 SEREGYNGSDYAPTYEDKDGDWMLVGDVPWGMFITTCKRLRIMRGSEAKGLA 179 S + +Y TYEDKD DWMLVGD+PW +F T+C++LRIMRGS+A G+A Sbjct: 219 SRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMA 270 The following BLAST results are available for this feature:
BLAST of FC873045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873045 ID=FC873045; Name=FC873045; organism=Citrus clementina; type=EST; length=423bpback to top |