FC873063

Overview
NameFC873063
Unique NameFC873063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length341
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10211 contig Ccv1_Contig10211:127..467. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 1.756e-36
Identity = 73/108 (67.59%), Postives = 93/108 (86.11%), Query Frame = 3
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F+ADI+ ++SLIIN FYSNKEIFLRELISN+SDAL+ IR+E++ D  +++ QP+ +I +  DK NNTL+I DSGIGMTKADLVNNLGTIA+SGT+ FMEAL AG+D+S
Sbjct:   15 FNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMS 122          
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.756e-36
Identity = 73/108 (67.59%), Postives = 93/108 (86.11%), Query Frame = 3
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F+ADI+ ++SLIIN FYSNKEIFLRELISN+SDAL+ IR+E++ D  +++ QP+ +I +  DK NNTL+I DSGIGMTKADLVNNLGTIA+SGT+ FMEAL AG+D+S
Sbjct:   15 FNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMS 122          
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.756e-36
Identity = 76/108 (70.37%), Postives = 90/108 (83.33%), Query Frame = 3
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+IT +MSLIINT YSNKEIFLRELISN+SDALD IR++SL+D  +L+ +P+LFI I P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:    8 FQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 115          
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 150.984 bits (380), Expect = 1.756e-36
Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 3
Query:    3 GHSNVFHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            G +  F A+IT +MSLIINT YSNKEIFLRELISN+SDALD IR+++L+D  +L+ +P+LFI I P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:    3 GETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPKQLETEPDLFIRITPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 115          
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 2.294e-36
Identity = 78/109 (71.56%), Postives = 92/109 (84.40%), Query Frame = 3
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAG-ADVS 341
            F A+I  +MSLIINTFYSNKE+FLRELISN+SDALD IR++SLTD S L+++ EL I IIPDKT  TL++IDSGIGMTK D+V NLGTIARSGTK FME L +G AD+S
Sbjct:   11 FQAEINQLMSLIINTFYSNKEVFLRELISNASDALDKIRYQSLTDASVLESKTELEIKIIPDKTAKTLTLIDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADIS 119          
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 2.996e-36
Identity = 76/108 (70.37%), Postives = 89/108 (82.41%), Query Frame = 3
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+IT +MSLIINT YSNKEIFLRELISN+SDALD IR++SL+D   L++ PELFI + P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:    9 FQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPKVLESDPELFIRLTPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 116          
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.913e-36
Identity = 75/108 (69.44%), Postives = 89/108 (82.41%), Query Frame = 3
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  +MSLIINTFYSNKEIFLR++ISN+SDA D IR++SLTD S L     L + ++PDK N TL++ D+GIGMTKADLVNNLGTIARSGTK FMEAL AGAD+S
Sbjct:    7 FQAEINQLMSLIINTFYSNKEIFLRDVISNASDACDKIRYQSLTDPSVLGDATRLCVRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGADMS 114          
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.111e-36
Identity = 75/108 (69.44%), Postives = 90/108 (83.33%), Query Frame = 3
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  +MSLIINTFYSNKEIFLRELISNSSDA D IR++SLT+++ L  +  L I ++PDK N TL++ D+GIGMTKA+LVNNLGTIARSGTK FMEAL AG D+S
Sbjct:    7 FQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQAVLGDESHLRIRVVPDKANKTLTVEDTGIGMTKAELVNNLGTIARSGTKAFMEALEAGGDMS 114          
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 3.662e-34
Identity = 75/108 (69.44%), Postives = 85/108 (78.70%), Query Frame = 3
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  +MSLIINTFYSNKEIFLRELISN+SDALD IR+ S TD  KL          IP+KT  TL+IID+GI MTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   10 FQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYXSXTDPXKLXXXXXXXXXXIPNKTAGTLTIIDTGIXMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117          
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.021e-33
Identity = 71/103 (68.93%), Postives = 86/103 (83.50%), Query Frame = 3
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 326
            F A+I  ++SLIINTFYSN+EIFL+ELISN+SDALD IR+ESLTD SKLD+  EL I IIP+    TL+++D+GIGMTKADL+NNL TIA+SGTK  MEAL A
Sbjct:   17 FQAEIAQLISLIINTFYSNEEIFLQELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLALVDTGIGMTKADLINNLRTIAKSGTKACMEALQA 119          
The following BLAST results are available for this feature:
BLAST of FC873063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSP90_THEPA1.756e-3667.59Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP90_THEAN1.756e-3667.59Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP82_YEAST1.756e-3670.37ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSC82_YEAST1.756e-3667.26ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSC90_DICDI2.294e-3671.56Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP82_ASHGO2.996e-3670.37Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSP83_LEIAM3.913e-3669.44Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSP85_TRYCR5.111e-3669.44Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP83_DROPB3.662e-3469.44Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
H90B3_HUMAN9.021e-3368.93Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CB11FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CB11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873063 ID=FC873063; Name=FC873063; organism=Citrus clementina; type=EST; length=341bp
AGGGCCATTCCAACGTCTTTCATGCTGACATCACCCTGATGATGAGTTTG
ATCATCAACACCTTTTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCAT
CAGCAACTCCTCCGATGCATTGGATAACATCAGATTTGAAAGCTTGACAG
ACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATCCACATTATCCCT
GATAAGACCAACAACACTTTGTCTATTATTGACAGTGGCATTGGCATGAC
TAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTAGGTCTGGGACCA
AAGAGTTCATGGAGGCATTGGCTGCAGGGGCGGATGTGAGC
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