FC873063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJD (Chaperone protein htpG OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=htpG PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.654e-24 Identity = 57/105 (54.29%), Postives = 74/105 (70.48%), Query Frame = 3 Query: 18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 332 F ++ ++ L+I++ YSNKEIFLRELISN+SDALD + F S++D + E I I DK TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+ A Sbjct: 3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKNDLINNLGTIAKSGTKSFLENLSGDA 107
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJ8 (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=htpG PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.654e-24 Identity = 57/105 (54.29%), Postives = 74/105 (70.48%), Query Frame = 3 Query: 18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 332 F ++ ++ L+I++ YSNKEIFLRELISN+SDALD + F S++D + E I I DK TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+ A Sbjct: 3 FQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSA (Chaperone protein htpG OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=htpG PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 9.997e-24 Identity = 53/110 (48.18%), Postives = 78/110 (70.91%), Query Frame = 3 Query: 18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA--DVS 341 F A++ ++ +++++ YSNKEIFLRELISN+SD+ D +R+ ++T+ LD E I ++PDK TL+IID+G GM+ +L+ NLGTIA+SGT EF+ L A DVS Sbjct: 8 FQAEVGKLLDIVVHSLYSNKEIFLRELISNASDSCDRLRYGAITEPDLLDGDSEFRIRLVPDKDAGTLTIIDNGQGMSHDELIANLGTIAKSGTSEFLARLTGDAKKDVS 117
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HTPG_RALEH (Chaperone protein htpG OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=htpG PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23 Identity = 52/102 (50.98%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 323 F A++ ++ L+I++ YSNKEIFLREL+SN+SDA D +RFE++ + S L+ +L I I D TL+I D+GIGM++ + ++NLGTIARSGTKEF + L+ Sbjct: 10 FQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDATDKLRFEAIANPSLLENDADLAIRIEADAKARTLTITDNGIGMSRDEAIHNLGTIARSGTKEFFQQLS 111
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HTPG_METFK (Chaperone protein htpG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=htpG1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23 Identity = 51/101 (50.50%), Postives = 76/101 (75.25%), Query Frame = 3 Query: 18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 320 F A++ ++ L+I++ YSNKEI LRELISN+SDA D +RFE+L D S +L I + DK T++I D+GIGM++ +++NN+GTIA+SGTKEF+++L Sbjct: 13 FQAEVKQLLQLMIHSLYSNKEIVLRELISNASDAADKLRFEALADNSLYGNDSDLKIRVSFDKQARTITISDNGIGMSREEVINNIGTIAKSGTKEFLQSL 113
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HTPG_THIDA (Chaperone protein htpG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=htpG PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.227e-23 Identity = 50/102 (49.02%), Postives = 78/102 (76.47%), Query Frame = 3 Query: 18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 323 F A++ ++ L+I++ YSNK+IFLRELISN+SDA D +RFE+L+D + + PEL I I D+ TL+I D+GIGM++ ++++++GTIA+SGT+EF L+ Sbjct: 12 FQAEVKQLLQLMIHSLYSNKDIFLRELISNASDAADKLRFEALSDAALFENDPELKIRIAFDRDARTLTISDNGIGMSRQEVIDHIGTIAKSGTREFFSQLS 113
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HTPG_RALEJ (Chaperone protein htpG OS=Ralstonia eutropha (strain JMP134) GN=htpG PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.227e-23 Identity = 52/102 (50.98%), Postives = 74/102 (72.55%), Query Frame = 3 Query: 18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 323 F A++ ++ L+I++ YSNKEIFLREL+SN+SDA D +RFE++ + S L+ +L I I D TL I D+GIGM++ + + NLGTIARSGTKEF + L+ Sbjct: 10 FQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDATDKLRFEAIANPSLLENDADLAIRIEADTAARTLKITDNGIGMSRDEAIRNLGTIARSGTKEFFQQLS 111
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HTPG_VESOH (Chaperone protein htpG OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=htpG PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.909e-23 Identity = 49/101 (48.51%), Postives = 80/101 (79.21%), Query Frame = 3 Query: 18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 320 F +++ ++ L+I++ YSNKEIFLRELISN+SDA+D ++F+SL+D + ++ + L IHI +K NT++I D+GIGM++ ++ N+GTIA SGTK+F+++L Sbjct: 9 FQTEVSQLLHLMIHSLYSNKEIFLRELISNASDAVDKLKFKSLSDDTLIEGKEALQIHIDVNKDANTITITDNGIGMSEVEVNKNIGTIANSGTKKFLKSL 109
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HTPG_NITMU (Chaperone protein htpG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=htpG PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.909e-23 Identity = 48/101 (47.52%), Postives = 78/101 (77.23%), Query Frame = 3 Query: 18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 320 F ++ ++ L+I++ YSNKEIFLRELISN+SDA D +RFE+LTD + ++ +L I + DK T+++ D+GIGM++ ++++++GTIA+SGT+EF +AL Sbjct: 12 FQTEVKQLLKLMIHSLYSNKEIFLRELISNASDAADKLRFEALTDGALYESDSDLKIRVSYDKEARTITVADNGIGMSRQEVIDHIGTIAKSGTREFFDAL 112
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HTPG_CUPTR (Chaperone protein htpG OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=htpG PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.909e-23 Identity = 52/102 (50.98%), Postives = 74/102 (72.55%), Query Frame = 3 Query: 18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 323 F A++ ++ L+I++ YSNKEIFLREL+SN+SDA D +RFE++ + S L+ +L I I D TL I D+GIGM++ + + NLGTIARSGTKEF + L+ Sbjct: 10 FQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDATDKLRFEAIANPSLLENDADLAIRIEADAKARTLKITDNGIGMSRDEAIRNLGTIARSGTKEFFQQLS 111 The following BLAST results are available for this feature:
BLAST of FC873063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873063 ID=FC873063; Name=FC873063; organism=Citrus clementina; type=EST; length=341bpback to top |