FC873064

Overview
NameFC873064
Unique NameFC873064
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length785
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873064 vs. ExPASy Swiss-Prot
Match: CONB_CANEN (Concanavalin B OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.478e-35
Identity = 98/253 (38.74%), Postives = 131/253 (51.78%), Query Frame = 2
Query:   44 TLSLIKASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFG-NGQTPEINLAGHCNPAAGG-CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQG-STLHWDDLARFLSAYSSRGKKVYL-TAAPQCPFPDRFLGAALNTGLFDYVWVQFYNNPPCQYSSGNTQNLISSFNRWASSL--RNGKLFLGL-XXXXXXXXSGYIPPNVL 781
            TLSL   S     IA+YWGQ   +G L  TC T  Y  V I+FL+KFG   + PE+ L G C P+ G  C  +   IK CQ  G+KV                  AK++A+YL   FL       PLG   LDGI FDI++    L+WD+L   L       +  +L +AAP C  PD +L  A+ T  FDY++V+FYN+  CQYS+GN Q + +++  W  S+  R+  LFL L          GYIPP+ L
Sbjct:   21 TLSLADISSTE--IAVYWGQR-EDGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSFLESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSERREG-PLGKVALDGIHFDIQKPVDELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDEYLDNAIQTRHFDYIFVRFYNDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSAL 269          
BLAST of FC873064 vs. ExPASy Swiss-Prot
Match: XIP1_ORYSJ (Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.909e-33
Identity = 84/228 (36.84%), Postives = 123/228 (53.95%), Query Frame = 2
Query:   62 ASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS--RPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKK---VYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFLGL 730
            A+   G + ++WG+N NEGTL  TC TG Y  V I+F + FG+G+    +L+GH        RV+   IK CQS+ I V                  A +VAD +WN  + G      RP G A +DGIDF I+QG+  H+DDLAR L AY+   +    V LTA  +C FPD  +  AL+T LF+ + V+FY++  C Y+      +++ +N+W +      ++LGL
Sbjct:   29 AAGKTGQMTVFWGRNKNEGTLKETCDTGLYTTVVISFYSVFGHGRYWG-DLSGH------DLRVIGADIKHCQSKNIFVFLSIGGAGKDYSLPTSKSAADVADNIWNAHMDGRRPGVFRPFGDAAVDGIDFFIDQGAPDHYDDLARNLYAYNKMYRARTPVRLTATVRCAFPDPRMKKALDTKLFERIHVRFYDDATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGL 249          
BLAST of FC873064 vs. ExPASy Swiss-Prot
Match: CHI1_RHIOL (Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.493e-33
Identity = 95/274 (34.67%), Postives = 141/274 (51.46%), Query Frame = 2
Query:   23 TFVSLLVTLSL----IKASQGAGG--IAIYWGQNGNEGTLTST-----CATGKYAYVNIAFLNKFGNGQTPEINLAGHC------NPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLT-AAPQCPFPDRFLGAALNTGLFDYVWVQFYNNPPCQYSSGNTQNLISSFNRWA---SSLRNGKLFLGLXXXXXXXXSGYIPPNVL 781
            TF+ + ++  L    ++A+  + G  +  YWGQN   G+ T       C +G+   V ++FL+ F  G TPEINL+  C      N     C  V   IK CQ +G+KV+                  +  A  +WN F GG+S +RP G AV+DG+D DIE G++  +   A F++A   +    +L  AAPQCPFPD  LG+ LN+  FDYV VQFYNN  C  ++G++ N   +++ WA   S  +N K+   +        SGY+P + L
Sbjct:    5 TFLGMAISAFLASTGVQAAWSSNGPNVMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGTPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLFGGGSSDTRPFGDAVIDGVDLDIEGGASTGY---AAFVNALRQKFSSNFLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNN-YCS-ATGSSFN-FDTWDNWAKTTSPNKNVKIMFTIPGSPTAAGSGYVPMSTL 272          
BLAST of FC873064 vs. ExPASy Swiss-Prot
Match: XIP2_ORYSJ (Xylanase inhibitor protein 2 OS=Oryza sativa subsp. japonica GN=Chib3H-h PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.472e-33
Identity = 90/243 (37.04%), Postives = 130/243 (53.50%), Query Frame = 2
Query:   20 ATFVSLLVTLSLIKASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGG--TSSSRPLG-AAVLDGIDFDIEQGSTLHWDDLARFLSAYSS--RGK-KVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFLGL 730
            A   +LL+  +   A+    G+A+YWG++  EG+L   C TG+Y  V I F N FG+G+   ++++GH   A G        IK CQSRGI V+                 A +VAD LWN +LGG     +RP G  A +DGIDF I+QG   H+DDLAR L  Y+   RG+  V LTA  +C +PD  L  AL TG+F  + V+ + +  C      T +   S+ +WA++    K+++GL
Sbjct:   11 AAAAALLLLAAPPPATADDPGLAVYWGRHKEEGSLREACDTGRYTTVIITFYNAFGHGRY-SLDISGHPLAAVGA------DIKHCQSRGITVLLSIGGQGGAYSLPTNASAADVADNLWNAYLGGHRAGVARPFGDDAAVDGIDFFIDQGGADHYDDLARRLDGYNKYYRGRVGVLLTATTRCSYPDHRLEKALATGVFARIHVRMFGDEQC------TMSPRYSWEKWAAAFPGSKVYIGL 240          
BLAST of FC873064 vs. ExPASy Swiss-Prot
Match: CHI2_RHIOL (Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.701e-32
Identity = 94/274 (34.31%), Postives = 138/274 (50.36%), Query Frame = 2
Query:   23 TFVSLLVTLSL----IKASQGAGG--IAIYWGQNGNEGTLTST-----CATGKYAYVNIAFLNKFGNGQTPEINLAGHC------NPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLT-AAPQCPFPDRFLGAALNTGLFDYVWVQFYNNPPCQYSSGNTQNLISSFNRWA---SSLRNGKLFLGLXXXXXXXXSGYIPPNVL 781
            TF+ + ++  L    ++A+  + G  +  YWGQN   G+ T       C +G+   V ++FL+ F  G  PEINL+  C      N     C  V   IK CQ +G+KV+                  +  A  +WN F GG S +RP G AV+DG+D DIE GS+  +     F++A   +    +L  AAPQCPFPD  LG+ LN+  FDYV VQFYNN  C  ++G++ N   +++ WA   S  +N K+   +        SGY+P + L
Sbjct:    5 TFLGMAISAFLASTGVQAAWSSHGPNVMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGIPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLFGGGNSDTRPFGDAVIDGVDLDIEGGSSTGY---VAFVNALRQKFSSNFLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNN-YCS-ATGSSFN-FDTWDNWAKTTSPNKNVKIMFTVPGSSTAAGSGYVPMSTL 272          
BLAST of FC873064 vs. ExPASy Swiss-Prot
Match: CHI1_CANAL (Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.280e-29
Identity = 86/252 (34.13%), Postives = 121/252 (48.02%), Query Frame = 2
Query:   38 LVTLSLIKASQGAGGIAIYWGQN--GNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGG----CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG-KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNNPPCQYSSGNTQNLISSFNRWASSLRNG--KLFLGLXXXXXXXXSGYI 766
            L+ L  I     A  IA YWGQN  G++ TL   C++   + + ++FL+ F N     +N A  C+         C  +   IKSCQ +G  ++                +A   A  LWN F GG  S RP   A++DG DFDIE      +  LA  L  Y S G K  YL+AAPQCP+PD  +G  ++    D+ ++QFYNN    Y S N Q    ++N W++  R    KL+LGL        SG++
Sbjct:    5 LIILLAISIVASASNIAAYWGQNAGGDQQTLGDYCSSSPASIIILSFLDGFPN---LSLNFANQCSGTFSSGLAHCSQIGSDIKSCQQQGKTILLSLGGATGNYGFSSDSEAVQFAGTLWNKFGGGKDSERPFDDAIVDGFDFDIENKDQTGYAALATQLRKYFSTGTKSYYLSAAPQCPYPDESVGDLMSQVDLDFAFIQFYNN----YCSLNQQ---FNWNSWSNYARGKSIKLYLGLPGSSSSAGSGFV 246          
BLAST of FC873064 vs. ExPASy Swiss-Prot
Match: CHIT_YEAST (Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.118e-28
Identity = 82/236 (34.75%), Postives = 119/236 (50.42%), Query Frame = 2
Query:   83 IAIYWGQN--GNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGG----CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS-RPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG-KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFLGLXXXXXXXXSGYI 766
            IA+YWGQN  G + +L + C +       ++FLN+F    T  +N A  C+         C  +++ I++CQS G KV+                 A+  A  LW+ F  GT +S RP  +AV+DG DFDIE  + + +  LA  L    + G K+ YL+AAPQCP+PD  +G  L     D+ ++QFYNN  C  S     +   ++ +  S  +N KLFLGL        SGYI
Sbjct:   29 IAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQF---PTLGLNFANACSDTFSDGLLHCTQIAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEGTGASERPFDSAVVDGFDFDIENNNEVGYSALATKLRTLFAEGTKQYYLSAAPQCPYPDASVGDLLENADIDFAFIQFYNN-YCSVSGQFNWDTWLTYAQTVSPNKNIKLFLGLPGSASAAGSGYI 260          
BLAST of FC873064 vs. ExPASy Swiss-Prot
Match: CHI2_CANAL (Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.260e-26
Identity = 85/248 (34.27%), Postives = 119/248 (47.98%), Query Frame = 2
Query:   23 TFVSLLVTLSLIKASQGAGG--IAIYWGQNGNEGT--LTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHC-NPAAGG---CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSR--GKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNNPPCQYSSGNTQNLISSFNRWASSL--RNGKLFLGL 730
            +F SLL    +  ++  +    +A+YWGQNG  G   L   C       V ++FLN F +     +N A  C N    G   C  +   IK+CQS G  V+                 A   AD LWN F  G    RP   AV+DG DFDIE G    + +LA  L    ++   K  +L+AAPQCP+PD  LG  L+    D+ ++QFYNN    Y S N Q    +++++A S   +N KLF+G+
Sbjct:    3 SFKSLLAAAVVASSALASASNQVALYWGQNGAGGQERLAQYCQETDVDIVLLSFLNLFPDPLN--VNFANQCGNTFESGLLHCSQIGADIKTCQSLGKTVLLSLGGGVGDYGFSDVASATKFADTLWNKFGAGEDPERPFDDAVVDGFDFDIEHGGATGYPELATALRGKFAKDTSKNYFLSAAPQCPYPDASLGDLLSKVPLDFAFIQFYNN----YCSINGQFNYDTWSKFADSAPNKNIKLFVGV 244          
BLAST of FC873064 vs. ExPASy Swiss-Prot
Match: XIP1_WHEAT (Xylanase inhibitor protein 1 OS=Triticum aestivum GN=XIPI PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.240e-24
Identity = 74/246 (30.08%), Postives = 126/246 (51.22%), Query Frame = 2
Query:   17 IATFVSLLVTLSLIKASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS--RPLGAAVLDGIDFDIEQGSTL-HWDDLARFLSAYSSR---GKKVYLTAAPQCPFPD-RFLGAALNTGLFDYVWVQFYNNPP-CQYSSGNTQNLISSFNRWASSLRNGKLFLGL 730
            ++   +L +T + + A    G + ++WG+N  EG+L   C +G Y  V ++FL+ FG      ++L+GH   + G        IK CQS+G+ V                  A ++ D+LWN++ GG+  S  RP G A LDG+D  +E G+    +D LA  L+ ++ R   GK ++LTA  +C +P    +G AL TG+F+ V V+ Y +   C  + G       S+++W ++    + ++GL
Sbjct:   16 LSVAAALFLTPTALAAGGKTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGA------DIKHCQSKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAWLDGVDLFLEHGTPADRYDVLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDKWCNQNLG----WEGSWDKWTAAYPATRFYVGL 251          
BLAST of FC873064 vs. ExPASy Swiss-Prot
Match: CHI3_CANAL (Chitinase 3 OS=Candida albicans GN=CHT3 PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.154e-24
Identity = 82/268 (30.60%), Postives = 127/268 (47.39%), Query Frame = 2
Query:   17 IATFVSLLVTLSLIKASQGAGGIAIYWGQN--GNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPA--AGG---CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGG---TSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSR--GKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNNPPCQYSSGNTQNLISSFNRWASSLRNGKLFLGLXXXXXXXXSGYIPPNVLT 784
            + T  SLL+    I A   +  +A+YWGQN  G++  L+  C +     V ++F+++F +    ++N A  C     A G   C+ +++ IK CQ++G  ++                 AK  A  LW+ F       ++ RP   AVLDG DFDIE   +  +  LA  L     +   K  YL AAPQCP+PD  +G  L     D+V++QFYNN     SS    +   ++    S  +N KLF+G+        SGY  P+ ++
Sbjct:    4 LLTIFSLLLPALAINARSNSN-VAVYWGQNSGGSQQRLSYYCDSDAVDIVILSFMHQFPS--PIQLNFANACEGTYTANGILQCQTIAEDIKYCQNKGKTILLSLGGAAGSYGFSDDATAKQFAHTLWDLFGNSKNLATNDRPFYDAVLDGFDFDIENNWSTGYPALATELRTLFQKDTSKNYYLGAAPQCPYPDASVGPLLKQSEIDFVFIQFYNNYCNLGSSSFNWDTWLNYAETDSPNKNIKLFVGVPASSRAAGSGYNDPSAVS 268          
The following BLAST results are available for this feature:
BLAST of FC873064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CONB_CANEN3.478e-3538.74Concanavalin B OS=Canavalia ensiformis PE=1 SV=1[more]
XIP1_ORYSJ1.909e-3336.84Xylanase inhibitor protein 1 OS=Oryza sativa subsp... [more]
CHI1_RHIOL2.493e-3334.67Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 S... [more]
XIP2_ORYSJ9.472e-3337.04Xylanase inhibitor protein 2 OS=Oryza sativa subsp... [more]
CHI2_RHIOL4.701e-3234.31Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 S... [more]
CHI1_CANAL1.280e-2934.13Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2[more]
CHIT_YEAST4.118e-2834.75Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 ... [more]
CHI2_CANAL2.260e-2634.27Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1[more]
XIP1_WHEAT1.240e-2430.08Xylanase inhibitor protein 1 OS=Triticum aestivum ... [more]
CHI3_CANAL6.154e-2430.60Chitinase 3 OS=Candida albicans GN=CHT3 PE=3 SV=2[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI2CB12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CB12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873064 ID=FC873064; Name=FC873064; organism=Citrus clementina; type=EST; length=785bp
CAGAAACTCTCCAGCAATAGCAACATTCGTCTCCCTGCTGGTCACTCTGT
CATTGATCAAAGCCTCTCAAGGCGCCGGCGGCATCGCAATCTATTGGGGC
CAAAACGGCAACGAGGGTACCCTCACTTCAACCTGTGCCACAGGCAAATA
TGCTTATGTCAACATAGCTTTCCTGAACAAGTTTGGCAACGGCCAGACCC
CTGAAATTAACCTTGCCGGCCACTGCAACCCTGCAGCCGGTGGCTGCAGA
GTCGTCAGCGACGCAATCAAGAGTTGTCAGAGCCGAGGCATCAAAGTTAT
GCTTTCCCTCGGAGGTGGGGTTGGTAGCTACTCTTTGGCTTCTGTAGCTG
ATGCCAAGAATGTAGCTGATTACTTGTGGAACAATTTCTTGGGGGGAACA
TCAAGTTCAAGGCCATTAGGTGCTGCTGTGTTGGACGGTATTGATTTTGA
TATTGAGCAAGGCTCAACTTTGCATTGGGATGACCTTGCAAGGTTTCTAT
CAGCATATAGCAGCCGTGGCAAGAAAGTTTACTTAACAGCAGCTCCCCAG
TGCCCATTTCCTGATAGGTTTCTGGGTGCTGCTTTGAACACGGGGCTTTT
TGATTATGTATGGGTTCAGTTTTACAACAACCCACCTTGTCAGTATAGTT
CAGGAAATACCCAGAATCTTATAAGTTCATTTAACAGATGGGCTTCATCA
TTGAGAAATGGGAAGTTGTTTTTGGGGCTGCCAGCAGCTCCTGCTGCCGC
ANGCAGCGGGTATATTCCACCGAATGTGTTAACTT
back to top