FC873069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.786e-35 Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 2 Query: 5 IEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 +EGVV EI+ITF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA+ +F NW+YWV Sbjct: 140 LEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWV 219
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.180e-28 Identity = 57/107 (53.27%), Postives = 73/107 (68.22%), Query Frame = 2 Query: 8 EGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSEHAPLSND 328 +G++ EII+TF L++TVYAT DPKKGSL P+ GF+VGANILA G FSG SMNPARSFGPA+ SGN+ D+W+YWV NV + H P+++D Sbjct: 137 QGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYENVLIDRPHVPVADD 243
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.180e-28 Identity = 58/81 (71.60%), Postives = 69/81 (85.19%), Query Frame = 2 Query: 2 AIEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 A+ VV+E+++TFGLVYTVYATA DPKKG LG IAPIAIGFIVGANILA G F G SMNPA SFGPAV +G ++++W+YWV Sbjct: 141 AMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWENHWVYWV 221
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.541e-28 Identity = 58/79 (73.42%), Postives = 67/79 (84.81%), Query Frame = 2 Query: 8 EGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 E +V+EI++TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL G F G SMNPA SFGPA+ S +++ W+YWV Sbjct: 142 EALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWESQWVYWV 220
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.432e-28 Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 2 AIEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 A+ G+V+EII+TFGLVY VY+T DPK+GSLG IAP+AIG IVGANIL GPFSG SMNPAR+FGPA+ + D+WIYWV Sbjct: 149 AVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWRWHDHWIYWV 229
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.854e-28 Identity = 64/109 (58.72%), Postives = 73/109 (66.97%), Query Frame = 2 Query: 8 EGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSEHAPL-SNDY 331 E +V+EI++TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL G F G SMNPA SFGPA+ S + W+YWV +F+ H L S DY Sbjct: 142 EALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWEWGYQWVYWVGPLIGGGLAGVIYELLFISHTHEQLPSTDY 250
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.986e-28 Identity = 58/81 (71.60%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 2 AIEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 A VV EI++TFGLVYTVYATA DPKKG LG IAPIAIGFIVGANILA G F G SMNPA SFGPAV +G + ++W+YW+ Sbjct: 141 AWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWDNHWVYWL 221
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 9.986e-28 Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 2 Query: 2 AIEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYW 241 ++ +V EI++TFGLVYTVYATA DPK GSLGTIAPIAIGFIVGANILA G FSG SMNPA +FGPAV S + ++W+YW Sbjct: 142 SLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYW 221
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.703e-27 Identity = 60/107 (56.07%), Postives = 76/107 (71.03%), Query Frame = 2 Query: 14 VVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSEHAPL-SNDY 331 +V+EI++TFGLVYTVYATA DPKKG++G IAPIAIGFIVGANIL G F+G SMNPA SFGPAV S ++ ++W+YW +F++S H L + DY Sbjct: 144 LVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINSTHEQLPTTDY 250
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.703e-27 Identity = 60/107 (56.07%), Postives = 76/107 (71.03%), Query Frame = 2 Query: 14 VVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSEHAPL-SNDY 331 +V+EI++TFGLVYTVYATA DPKKG++G IAPIAIGFIVGANIL G F+G SMNPA SFGPAV S ++ ++W+YW +F++S H L + DY Sbjct: 143 LVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINSTHEQLPTTDY 249 The following BLAST results are available for this feature:
BLAST of FC873069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873069 ID=FC873069; Name=FC873069; organism=Citrus clementina; type=EST; length=613bpback to top |