FC873069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.703e-27 Identity = 62/110 (56.36%), Postives = 74/110 (67.27%), Query Frame = 2 Query: 5 IEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSEHAPL-SNDY 331 + V EI++TFGLVYTVYATA DPK GSLGTIAPIAIGFIVGANILA G FSG SMNPA +FGPAV S + ++W+YW F+++ H L + DY Sbjct: 142 LNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVGGGIAGLIYEVFFINTTHEQLPTTDY 251
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.453e-27 Identity = 62/108 (57.41%), Postives = 73/108 (67.59%), Query Frame = 2 Query: 14 VVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFMHSE-HAPL-SNDY 331 VV EI++TFGLVYTVYATA DPKKG +G IAP+AIG IVGANIL G F G SMNPA SFGPAV S + ++W+YWV +F+ S H PL SND+ Sbjct: 145 VVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVSWIWTNHWVYWVGPFIGAAIAAIVYDTIFIGSNGHEPLPSNDF 252
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.212e-26 Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 2 Query: 5 IEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 + G++MEII+TF LVY VY+TA DPK+GS+G IAP+AIG IVGANIL GPF G SMNPAR+FGPA+ + ++WIYWV Sbjct: 150 LHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWRWSNHWIYWV 229
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.698e-24 Identity = 51/110 (46.36%), Postives = 72/110 (65.45%), Query Frame = 2 Query: 2 AIEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXXNVFM-HSEHAPLSND 328 A+ GV+ME ++TF L++ VYAT DP++ ++G + P+ +G +VGAN+LA GPFSG SMNPARSFGPA+ +G + D+W+YWV +FM H PL D Sbjct: 140 ALRGVLMEAVLTFSLLFAVYATVVDPRR-AVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWADHWVYWVGPLIGGPLAGLVYDGLFMAQGGHEPLPRD 248
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.949e-23 Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 14 VVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 V++E ++TFG VY YAT DPK+G LGTIAP+A+GF++GAN+LA GPF G MNPAR FGPA+ ++ +W+YW+ Sbjct: 154 VLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWL 230
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.342e-23 Identity = 43/77 (55.84%), Postives = 61/77 (79.22%), Query Frame = 2 Query: 14 VVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 V++E ++TFGL+Y YAT DPK+G +GTIAP+A+GF++GAN+LA GPF G MNPAR FGPA+ ++ +W+YW+ Sbjct: 149 VLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWL 225
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.155e-22 Identity = 43/77 (55.84%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 14 VVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 V++E +TFGL+Y YAT DPK+G +GTIAP+A+GF++GAN+LA GPF G MNPAR FGPA+ ++ +W+YW+ Sbjct: 150 VLLEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWL 226
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.814e-22 Identity = 45/77 (58.44%), Postives = 62/77 (80.52%), Query Frame = 2 Query: 14 VVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 +++E+++TFGLVYTVYATA D + G G IAP+AIG + GANILA GPF G +MNPAR+FGPA+ N++ +W+YW+ Sbjct: 152 LLLEVVMTFGLVYTVYATAVDRRSGG-GDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWNWRHHWVYWL 227
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.269e-22 Identity = 43/76 (56.58%), Postives = 59/76 (77.63%), Query Frame = 2 Query: 17 VMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 ++E+++TFGL+YTVY TA DPK+G++ IAP+AIG IVGANIL GPF G MNPA +FGP++ + +WI+WV Sbjct: 146 ILEVVMTFGLMYTVYGTAIDPKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQWHQHWIFWV 221
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.269e-22 Identity = 45/81 (55.56%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 2 AIEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244 A V ME ++TF L++ VYAT D ++ ++G + P+ +G +VGANILA GP+SG SMNPARSFGPA+A+G + D+WIYWV Sbjct: 139 AARAVAMEAVLTFSLLFAVYATVVDRRR-AVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWV 218 The following BLAST results are available for this feature:
BLAST of FC873069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873069 ID=FC873069; Name=FC873069; organism=Citrus clementina; type=EST; length=613bpback to top |