FC873069

Overview
NameFC873069
Unique NameFC873069
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length613
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 6.948e-13
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 2
Query:   14 VVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244
            +V EII+T  L   V   A + K  + G +AP +IGF V  +ILA GP SGG MNPAR+FGPAV + ++  +WIYW+
Sbjct:  158 LVAEIILTTLLALAVCMGAINEK--TKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWL 232          
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 9.074e-13
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 2
Query:    8 EGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244
            + V++E +ITF LV+ V A + DP +  +   AP+A+G  + A  L A   SG SMNPARSFGPAV  G +  +W+YWV
Sbjct:  137 QAVLIEALITFILVFVVKAVS-DPGRQDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVVQGVWTYHWVYWV 214          
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.548e-12
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 2
Query:   11 GVVMEIIITFGLVYTVYATA--------ADPKKGSLGT-IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYW 241
            G V+E ++TF LVYTV+            D K+    T +  +A+G   GA +LAAG  +G SMNPARSFGPAV SG+F++  +YW
Sbjct:  144 GAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVVSGHFKNQAVYW 229          
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.548e-12
Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    8 EGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244
            E + +EII+T  LV  V   A + K  ++G +AP +IGF V  +ILA G  SG  MNPAR+FGPAV +G +  +WIYW+
Sbjct:  156 EALGVEIILTILLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVVAGYWDFHWIYWL 232          
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.548e-12
Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    8 EGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244
            E + +EII+T  LV  V   A + K  ++G +AP +IGF V  +ILA G  SG  MNPAR+FGPAV +G +  +WIYW+
Sbjct:  156 EALGIEIILTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAGYWDFHWIYWL 232          
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.548e-12
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    8 EGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244
            +G+ +EII T  LV  V AT  D ++  LG  AP+AIGF V    L A  ++G  +NPARSFG AV + NFQD+W++WV
Sbjct:  139 QGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHNFQDHWVFWV 216          
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 2
Query:   17 VMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244
            VME I TF L++ + A A D  K + G+ A IAIG  +  +IL +GP SG SMNPARS GPA+  G ++D W+Y V
Sbjct:  170 VMEFIATFNLMFVISAVATD--KRATGSFAGIAIGATIVLDILFSGPISGASMNPARSLGPALIWGCYKDLWLYIV 243          
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 34/78 (43.59%), Postives = 50/78 (64.10%), Query Frame = 2
Query:    5 IEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIY 238
            ++ + ME IITF L++ V   A D +  ++G +A +A+G  V  N+L AGP SG SMNPAR+ GPA+  G +   W+Y
Sbjct:  170 VQSLAMEFIITFYLMFVVSGVATDNR--AIGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPAIILGRYTGIWVY 245          
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = 2
Query:    8 EGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244
            + +V EIII+F L++ +   A D +  + G +A IA+G  +  N+  AGP SG SMNPARS GPA+  G ++  W+Y V
Sbjct:  160 QALVAEIIISFLLMFVISGVATDSR--ATGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIV 236          
BLAST of FC873069 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    8 EGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 244
            E + +EI++T  LV  V   A + K  ++G +AP +IGF V  +ILA G  SG  MNPAR+FGPAV +G +  +WIYW+
Sbjct:  158 EALGVEIVMTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVMAGYWDFHWIYWL 234          
The following BLAST results are available for this feature:
BLAST of FC873069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
AQP8_HUMAN6.948e-1349.35Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]
AQP_DROME9.074e-1346.84Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
TIP51_MAIZE1.548e-1245.35Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
AQP8_NOTAL1.548e-1248.10Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]
AQP8_MOUSE1.548e-1248.10Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
AQP1_PIG1.548e-1249.37Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
NIP31_ARATH2.640e-1250.00Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1... [more]
NIP13_ORYSJ2.640e-1243.59Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica G... [more]
NIP42_ARATH3.448e-1243.04Probable aquaporin NIP4-2 OS=Arabidopsis thaliana ... [more]
AQP8_RAT3.448e-1246.84Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CC05FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CC05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873069 ID=FC873069; Name=FC873069; organism=Citrus clementina; type=EST; length=613bp
AGCCATTGAAGGAGTTGTGATGGAGATCATCATCACATTTGGTTTGGTCT
ACACGGTCTATGCCACGGCAGCTGACCCCAAGAAGGGATCATTGGGCACC
ATTGCACCCATTGCCATTGGTTTCATTGTCGGTGCCAACATCCTGGCCGC
CGGCCCATTCTCCGGTGGTTCCATGAACCCGGCCCGTTCCTTCGGGCCTG
CCGTTGCCAGCGGCAACTTCCAGGACAACTGGATCTACTGGGTTGGCCCT
CTCATTGGCGGCGGCCTTGCGGGGCTCATCTATGGCAATGTGTTCATGCA
CTCTGAACATGCACCCCTATCTAATGACTATTAATTCATTAGTTAAACTT
TGTTTAAAAGTTTAGTTAAATCATTTGATCACCTGCTTTTGGCTCTTTCT
TTTTTGTAATAAAAGAAGGAAAAGCAGCTTTGGCTCTTTCTTCTTTTCTT
CTTTAGTTTCTTGGTATCCTTCTTTTTAAATCATTTCTTTTGGAGGTTGT
AAAAAGTCTTTGTTGTGGTGGTCCATTGCGGCTTTTCTGACGATAATGGA
TGGATTGGGAGACATGCTTGAATGACACTCTTTAGTCTTTAAAAAAAAAA
AAAAAAAAAAAAA
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