FC873070
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873070 vs. ExPASy Swiss-Prot
Match: TPSDB_ABIGR (Limonene/alpha-pinene synthase, chloroplastic OS=Abies grandis GN=ag11 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.384e-14 Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 2 Query: 191 RRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDDKVVDL-----DPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHN------------KNTNKSLYATALKFRILRQYGYNTPVKETFSRFMDEKGIF 568 RR AD+ P +W D+IQSL S Y G SY+ + + E+V M +L D L +L ++D++ RLG+ HF++EI+ LD +++ +T L +TAL R LR +GYN + F D+KG F Sbjct: 70 RRIADHHPNLWEDDFIQSLSSPYGGSSYSERAVTVVEEVKEMFNSIPNNRELFGSQNDLLTRLWMVDSIERLGIDRHFQNEIRVALDYVYSYWKEKEGIGCGRDSTFPDLNSTALALRTLRLHGYNVS-SDVLEYFKDQKGHF 211
BLAST of FC873070 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14 Identity = 63/205 (30.73%), Postives = 94/205 (45.85%), Query Frame = 2 Query: 188 IRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDDKVVDLDPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHNKNTNK------SLYATALKFRILRQYGYNTPVKETFSRFMDEKGIFKLSSHSDDCKGMXXXXXXXXXXXXXXSSIFRDATSFTTAYLXEWVIK-HDNIKHDDEHLCTLVNHALELPLH 781 +R A + PT+W + + + ESY ++ LK++V +L D + + LID L RLGVSYHFE++I+ L +I N + LY A+ FR+ RQ+G+ + FS+F D G FK S D KGM I +A +FT YL ++ N+K + +ALE P H Sbjct: 63 VRPLAYFPPTVWGNRFASLTFNPSEFESYDERVIVLKKKVKDILISSTS----DSVETVILIDLLCRLGVSYHFENDIEELLSKIFNSQPDLVDEKECDLYTAAIVFRVFRQHGFKMS-SDVFSKFKDSDGKFK-ESLRGDAKGM-LSLFEASHLSVHGEDILEEAFAFTKDYLQSSAVELFPNLKRH-------ITNALEQPFH 253
BLAST of FC873070 vs. ExPASy Swiss-Prot
Match: TPSD3_ABIGR (Pinene synthase, chloroplastic OS=Abies grandis GN=ag3 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.286e-13 Identity = 61/204 (29.90%), Postives = 99/204 (48.53%), Query Frame = 2 Query: 149 ASTTPIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKL----KEQVSAMLQQDDKVVDL--DPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHN-----------KNTNKSLYATALKFRILRQYGYNTPV-KETFSRFMDEKGIFKLSSH---SDDCKGMXXXXXXXXXXXXXXSSIFRDATSFTTAYLXE 697 +STT + D + RR D+ +W D IQSL + Y+ +SY + EKL K ++M +D +++ D + +L ++D+L RLG+ HF+DEIK LD +++ ++ L +TAL R LR +GY PV + F F + G F S + ++ +G+ I +A F+T YL E Sbjct: 52 SSTTVV--TDDGVRRRMGDFHSNLWDDDVIQSLPTAYEEKSYLERAEKLIGEVKNMFNSMSLEDGELMSPLNDLIQRLWIVDSLERLGIHRHFKDEIKSALDYVYSYWGENGIGCGRESVVTDLNSTALGLRTLRLHGY--PVSSDVFKAFKGQNGQFSCSENIQTDEEIRGV-LNLFRASLIAFPGEKIMDEAEIFSTKYLKE 250
BLAST of FC873070 vs. ExPASy Swiss-Prot
Match: TPS02_ARATH (Probable terpenoid synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS02 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.865e-13 Identity = 46/149 (30.87%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 359 QLELIDNLHRLGVSYHFEDEIKRTLDRIHNKN-----TNKSLYATALKFRILRQYGYNTPVKETFSRFMDEKGIFKLSSHSDDCKGMXXXXXXXXXXXXXXSSIFRDATSFTTAYLXEWVIKHDN--IKHDDEHLCTLVNHALELPLHW 784 +LE+ID+L RLG+SYH++ EI L +IH+++ + L+AT+L+F +LRQ+G++ ++ F F+ E G F+ + HS D KG+ + ++ + L E+V + + D+ ++ +V ALE P HW Sbjct: 109 ELEMIDSLQRLGISYHYKHEIHDILRKIHDQHGEIERETQDLHATSLEFILLRQHGFDVS-QDAFDVFISETGEFRKTLHS-DIKGLLSLYEASYFSMDSEFKL-KETRIYANKRLSEFVAESSKTICREDETYILEMVKRALETPYHW 254
BLAST of FC873070 vs. ExPASy Swiss-Prot
Match: TPSD8_ABIGR (Beta-phellandrene synthase, chloroplastic OS=Abies grandis GN=ag8 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.089e-12 Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 176 DQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKL----KEQVSAMLQQDDKVVD--LDPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHNKNTNKSL-----------YATALKFRILRQYGYNTPVKETFSRFMDEKGIFKLS 577 D + RR DY +W D+IQSL + Y SY + EKL KE ++M +D + + D + +L ++D++ RLG+ HF+ EIK LD +++ K + +TA FR LR +GY+ E F D+ G F S Sbjct: 57 DDGLQRRIGDYHSNLWDDDFIQSLSTPYGEPSYRERAEKLIGEVKEMFNSMPSEDGESMSPLNDLIERLWMVDSVERLGIDRHFKKEIKSALDYVYSYWNEKGIGCGRDSVFPDVNSTASGFRTLRLHGYSVS-SEVLKVFQDQNGQFAFS 206
BLAST of FC873070 vs. ExPASy Swiss-Prot
Match: TPSD2_ABIGR (Myrcene synthase, chloroplastic OS=Abies grandis GN=ag2 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.057e-12 Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 176 DQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKL----KEQVSAMLQQDDKVVDL--DPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIH-----------NKNTNKSLYATALKFRILRQYGYNTPVKETFSRFMDEKGIFKLS 577 D + RR DY IW D+IQSL + Y SY + E+L K+ ++M D +++ D + +L ++D++ RLG++ HF++EI LD + + L +TAL FR LR +GY T E F D+ G F S Sbjct: 59 DDGVQRRIGDYHSNIWDDDFIQSLSTPYGEPSYQERAERLIVEVKKIFNSMYLDDGRLMSSFNDLMQRLWIVDSVERLGIARHFKNEITSALDYVFRYWEENGIGCGRDSIVTDLNSTALGFRTLRLHGY-TVSPEVLKAFQDQNGQFVCS 208
BLAST of FC873070 vs. ExPASy Swiss-Prot
Match: TPSD9_ABIGR (Terpinolene synthase, chloroplastic OS=Abies grandis GN=ag9 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.217e-12 Identity = 44/145 (30.34%), Postives = 75/145 (51.72%), Query Frame = 2 Query: 176 DQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQ----QDDKVVDL--DPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHNKNTNK-----------SLYATALKFRILRQYGYNTPVKETFSRFMDEK 559 D + RR ++ +W D+IQSL + Y SY + ++L +V + +D +++ D + +L ++DN+ RLG+ HF++EIK LD +++ K L +TAL FRILR +GY+ + F +EK Sbjct: 60 DHGVQRRIVEFHSNLWDDDFIQSLSTPYGAPSYRERADRLIVEVKGIFTSISAEDGELITPLNDLIQRLLMVDNVERLGIDRHFKNEIKAALDYVYSYWNEKGIGSGSDSGVADLNSTALGFRILRLHGYSVS-SDVLEHFKEEK 203 The following BLAST results are available for this feature:
BLAST of FC873070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873070 ID=FC873070; Name=FC873070; organism=Citrus clementina; type=EST; length=784bpback to top |