FC873076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 1.526e-22 Identity = 50/83 (60.24%), Postives = 66/83 (79.52%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 DYLFK++LIGDS VGKS LL RF+ D + + STIGV+F+ + ++ +GK +K QIWDTAGQERFR +TS+YYRGA G ++VY Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB19_XENLA (Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.526e-22 Identity = 49/90 (54.44%), Postives = 67/90 (74.44%), Query Frame = 2 Query: 518 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 S ED D+LFK++LIGDS VGK+ ++ RF F N ++TIGV+F + ++INGK+VK Q+WDTAGQERFR +T +YYR A GA++ Y Sbjct: 6 SLEDDPFDFLFKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAY 95
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.993e-22 Identity = 49/83 (59.04%), Postives = 66/83 (79.52%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 DYL K++LIGDS VGKS LL RF+ F + +TIG++F+ + ++++GK +K QIWDTAGQERFR +T+AYYRGA+G LLVY Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVY 95
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.993e-22 Identity = 50/86 (58.14%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 530 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 R D+LFK+++IGDS VGKS+LL RFA + F + +TIGV+F+ + ++ING++VK QIWDTAGQERFR +TS YYRG G ++VY Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.993e-22 Identity = 50/86 (58.14%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 530 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 R D+LFK+++IGDS VGKS+LL RFA + F + +TIGV+F+ + ++ING++VK QIWDTAGQERFR +TS YYRG G ++VY Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.993e-22 Identity = 50/86 (58.14%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 530 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 R D+LFK+++IGDS VGKS+LL RFA + F + +TIGV+F+ + ++ING++VK QIWDTAGQERFR +TS YYRG G ++VY Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.993e-22 Identity = 49/83 (59.04%), Postives = 66/83 (79.52%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 DYL K++LIGDS VGKS LL RF+ F + +TIG++F+ + ++++GK +K QIWDTAGQERFR +T+AYYRGA+G LLVY Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVY 95
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.440e-22 Identity = 50/83 (60.24%), Postives = 66/83 (79.52%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQER R +TS+YYRGA G ++VY Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.799e-22 Identity = 49/83 (59.04%), Postives = 67/83 (80.72%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 DYLFK++LIG+S VGKS LL RF+ D + + STIGV+F+ + ++++GK VK QIWDTAGQERFR +TS+YYRG+ G ++VY Sbjct: 6 DYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 7.574e-22 Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 542 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 Y+FK ++IGD VGKS LL +F +F + TIGVEF T+ ++++G+++K QIWDTAGQERFRAVT +YYRGA GAL+VY Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVY 91 The following BLAST results are available for this feature:
BLAST of FC873076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873076 ID=FC873076; Name=FC873076; organism=Citrus clementina; type=EST; length=789bpback to top |