FC873076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 7.574e-22 Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 542 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 Y+FK ++IGD VGKS LL +F +F + TIGVEF T+ ++++G+++K QIWDTAGQERFRAVT +YYRGA GAL+VY Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVY 91
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 7.574e-22 Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 542 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 Y+FK ++IGD VGKS LL +F +F + TIGVEF T+ ++++G+++K QIWDTAGQERFRAVT +YYRGA GAL+VY Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVY 91
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 7.574e-22 Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 542 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 Y+FK ++IGD VGKS LL +F +F + TIGVEF T+ ++++G+++K QIWDTAGQERFRAVT +YYRGA GAL+VY Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVY 91
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4) HSP 1 Score: 104.375 bits (259), Expect = 7.574e-22 Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 542 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 Y+FK ++IGD VGKS LL +F +F + TIGVEF T+ ++++G+++K QIWDTAGQERFRAVT +YYRGA GAL+VY Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVY 91
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 7.574e-22 Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 542 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 Y+FK ++IGD VGKS LL +F +F + TIGVEF T+ ++++G+++K QIWDTAGQERFRAVT +YYRGA GAL+VY Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVY 91
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.892e-22 Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 542 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAGQE FR++T +YYRGA GALLVY Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 86
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.892e-22 Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 542 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAGQE FR++T +YYRGA GALLVY Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 86
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.892e-22 Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 542 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAGQE FR++T +YYRGA GALLVY Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 86
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.892e-22 Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 542 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAGQE FR++T +YYRGA GALLVY Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVY 86
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 9.892e-22 Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 D LFK++LIGDS VGKS LL RFA D + + STIGV+F+ Q ++++GK +K QIWDTAGQERF +TS+YYRGA G L+VY Sbjct: 6 DCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVY 88 The following BLAST results are available for this feature:
BLAST of FC873076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873076 ID=FC873076; Name=FC873076; organism=Citrus clementina; type=EST; length=789bpback to top |