FC873076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.007e-31 Identity = 70/94 (74.47%), Postives = 79/94 (84.04%), Query Frame = 2 Query: 506 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 MA Y ED DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++GK VKAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 1 MAGYRVEDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVY 93
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.233e-31 Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVY 92
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.233e-31 Identity = 65/87 (74.71%), Postives = 74/87 (85.06%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVY 92
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.233e-31 Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = 2 Query: 515 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 Y + + DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVY Sbjct: 5 YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVY 95
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.233e-31 Identity = 65/87 (74.71%), Postives = 74/87 (85.06%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVY 92
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 8.926e-31 Identity = 66/92 (71.74%), Postives = 79/92 (85.87%), Query Frame = 2 Query: 518 SEEDRAEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 S ED DY LFK+VLIGDS VGKSNLL+RF ++EF +SKSTIGVEF T+ ++I+GK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VY Sbjct: 2 SSEDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVY 93
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 133.65 bits (335), Expect = 1.166e-30 Identity = 64/87 (73.56%), Postives = 74/87 (85.06%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 D+ DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVY 92
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.166e-30 Identity = 65/87 (74.71%), Postives = 74/87 (85.06%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G+ VKAQIWDTAGQER+RA+TSAYYRGA+GALLVY Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVY 92
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.523e-30 Identity = 66/91 (72.53%), Postives = 78/91 (85.71%), Query Frame = 2 Query: 515 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 Y + + DY+FKVVLIGDSAVGK+ +LARFAR+EF +SK+TIGVEFQT+ + I K VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVY Sbjct: 5 YGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVY 95
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.523e-30 Identity = 67/94 (71.28%), Postives = 79/94 (84.04%), Query Frame = 2 Query: 506 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++ K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 1 MAGYRADDEY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVY 93 The following BLAST results are available for this feature:
BLAST of FC873076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873076 ID=FC873076; Name=FC873076; organism=Citrus clementina; type=EST; length=789bpback to top |