FC873076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.285e-25 Identity = 56/87 (64.37%), Postives = 72/87 (82.76%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 D +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIWDTAG ER+RA+TSAYYRGAVGALLV+ Sbjct: 6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVF 92
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.285e-25 Identity = 58/90 (64.44%), Postives = 75/90 (83.33%), Query Frame = 2 Query: 518 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 +EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIWDTAG ER+RA+TSAYYRGAVGALLV+ Sbjct: 5 TEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVF 92
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.291e-25 Identity = 58/88 (65.91%), Postives = 73/88 (82.95%), Query Frame = 2 Query: 530 RAEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 + EDY +FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIWDTAG ER+RA+TSAYYRGAVGALLV+ Sbjct: 5 KEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVF 92
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.291e-25 Identity = 57/90 (63.33%), Postives = 75/90 (83.33%), Query Frame = 2 Query: 527 DRAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 +RAE+ ++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + +KAQIWDTAG ER+RA+TSAYYRGAVGALLV+ Sbjct: 3 NRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVF 92
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.604e-25 Identity = 53/95 (55.79%), Postives = 72/95 (75.79%), Query Frame = 2 Query: 503 KMAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 K F + + ++LFK +++GDSAVGKSNLL +F F PNS TIGVEF ++ ++IN K++K QIWDTAGQE+FR++T AYYRGAV A++VY Sbjct: 10 KPTFNDRKSTSYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVY 104
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 7.319e-25 Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 +Y+FK ++IGD VGKS LL +F ++F P+S TIGVEF T+ +D+N K++K QIWDTAGQERFRAVT +YYRGA GALLVY Sbjct: 6 EYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.559e-25 Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 2 Query: 518 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 S ++ D + K++LIGDS VGKS LL RF D+F P+ +TIG++F+ + +DINGK+VK Q+WDTAGQERFR +T+AYYRGA+G +LVY Sbjct: 11 SGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVY 100
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.559e-25 Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 2 Query: 518 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 S ++ D + K++LIGDS VGKS LL RF D+F P+ +TIG++F+ + +DINGK+VK Q+WDTAGQERFR +T+AYYRGA+G +LVY Sbjct: 11 SGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVY 100
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.248e-24 Identity = 52/90 (57.78%), Postives = 70/90 (77.78%), Query Frame = 2 Query: 518 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 + + A DYL K++LIGDS VGKS LL RF+ D F P+ +TIG++F+ + +++ GK +K QIWDTAGQERFR +T+AYYRGA+G LLVY Sbjct: 6 TNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVY 95
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.632e-24 Identity = 50/86 (58.14%), Postives = 70/86 (81.40%), Query Frame = 2 Query: 530 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 ++ DYL K++LIGDS VGKS LL RF+ D F P+ +TIG++F+ + ++++GK +K QIWDTAGQERFR +T+AYYRGA+G LL+Y Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLY 89 The following BLAST results are available for this feature:
BLAST of FC873076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873076 ID=FC873076; Name=FC873076; organism=Citrus clementina; type=EST; length=789bpback to top |