FC873076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.196e-24 Identity = 50/86 (58.14%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 530 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 +A D+LFK++LIGDS VGK+ L+ RFA D F STIG++F+ + +DI GK +K Q+WDTAGQERF+ +T+AYYRGA+G +LVY Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.196e-24 Identity = 50/86 (58.14%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 530 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 +A D+LFK++LIGDS VGK+ L+ RFA D F STIG++F+ + +DI GK++K Q+WDTAGQERF+ +T+AYYRGA+G +LVY Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.196e-24 Identity = 50/86 (58.14%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 530 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 +A D+LFK++LIGDS VGK+ L+ RFA D F STIG++F+ + +DI GK++K Q+WDTAGQERF+ +T+AYYRGA+G +LVY Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.092e-24 Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 2 Query: 518 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 S R D L K++LIGDS VGKS LL RF D+F P+ +TIG++F+ + +DI + VK Q+WDTAGQERFR +T+AYYRGA+G LLVY Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVY 91
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.057e-23 Identity = 50/83 (60.24%), Postives = 68/83 (81.93%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 DYLFK++LIGDS VGK+ LL RF+ D F STIG++F+ + ++++GK++K QIWDTAGQERFR +T+AYYRGA+G +LVY Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.057e-23 Identity = 50/83 (60.24%), Postives = 68/83 (81.93%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 DYLFK++LIGDS VGK+ LL RF+ D F STIG++F+ + ++++GK++K QIWDTAGQERFR +T+AYYRGA+G +LVY Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.057e-23 Identity = 50/83 (60.24%), Postives = 68/83 (81.93%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 DYLFK++LIGDS VGK+ LL RF+ D F STIG++F+ + ++++GK++K QIWDTAGQERFR +T+AYYRGA+G +LVY Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.057e-23 Identity = 50/83 (60.24%), Postives = 68/83 (81.93%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 DYLFK++LIGDS VGK+ LL RF+ D F STIG++F+ + ++++GK++K QIWDTAGQERFR +T+AYYRGA+G +LVY Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.057e-23 Identity = 50/83 (60.24%), Postives = 68/83 (81.93%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 DYLFK++LIGDS VGK+ LL RF+ D F STIG++F+ + ++++GK++K QIWDTAGQERFR +T+AYYRGA+G +LVY Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVY 88
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.803e-23 Identity = 49/86 (56.98%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 530 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 +A D+LFK++LIGDS VGK+ L+ RFA D F STIG++F+ + ++I GK +K Q+WDTAGQERF+ +T+AYYRGA+G +LVY Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVY 88 The following BLAST results are available for this feature:
BLAST of FC873076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873076 ID=FC873076; Name=FC873076; organism=Citrus clementina; type=EST; length=789bpback to top |