FC873097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873097 vs. ExPASy Swiss-Prot
Match: DYL1_MOUSE (Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13 Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 3 KAVIGETDMLETMQQXXXXXXXXXXXXXXVTEPTEIARFIKKEFDKAYGTGWQCIVGTDFGSFVTHCYGNFIYFRVGSLAILLFR 257 KAVI DM E MQQ + + +IA IKKEFDK Y W CIVG +FGS+VTH +FIYF +G +AILLF+ Sbjct: 5 KAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFK 87
BLAST of FC873097 vs. ExPASy Swiss-Prot
Match: DYL1_MACFA (Dynein light chain 1, cytoplasmic OS=Macaca fascicularis GN=DYNLL1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13 Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 3 KAVIGETDMLETMQQXXXXXXXXXXXXXXVTEPTEIARFIKKEFDKAYGTGWQCIVGTDFGSFVTHCYGNFIYFRVGSLAILLFR 257 KAVI DM E MQQ + + +IA IKKEFDK Y W CIVG +FGS+VTH +FIYF +G +AILLF+ Sbjct: 5 KAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFK 87
BLAST of FC873097 vs. ExPASy Swiss-Prot
Match: DYL1_HUMAN (Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13 Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 3 KAVIGETDMLETMQQXXXXXXXXXXXXXXVTEPTEIARFIKKEFDKAYGTGWQCIVGTDFGSFVTHCYGNFIYFRVGSLAILLFR 257 KAVI DM E MQQ + + +IA IKKEFDK Y W CIVG +FGS+VTH +FIYF +G +AILLF+ Sbjct: 5 KAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFK 87
BLAST of FC873097 vs. ExPASy Swiss-Prot
Match: DYL1_BOVIN (Dynein light chain 1, cytoplasmic OS=Bos taurus GN=DYNLL1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13 Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 3 KAVIGETDMLETMQQXXXXXXXXXXXXXXVTEPTEIARFIKKEFDKAYGTGWQCIVGTDFGSFVTHCYGNFIYFRVGSLAILLFR 257 KAVI DM E MQQ + + +IA IKKEFDK Y W CIVG +FGS+VTH +FIYF +G +AILLF+ Sbjct: 5 KAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFK 87
BLAST of FC873097 vs. ExPASy Swiss-Prot
Match: DYL1_SCHPO (Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe GN=dlc2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12 Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 3 Query: 6 AVIGETDMLETMQQXXXXXXXXXXXXXXVTEPTEIARFIKKEFDKAYGTGWQCIVGTDFGSFVTHCYGNFIYFRVGSLAILLFR 257 AVI DM E MQQ + + +IA FIK+EFDK + W CIVG +FGSFVTH +FIYF +G++A LLF+ Sbjct: 2 AVIKAVDMSEKMQQEAIHAAVQAMEKFTIEK--DIAAFIKREFDKKFSPTWHCIVGRNFGSFVTHESRHFIYFYLGTVAFLLFK 83
BLAST of FC873097 vs. ExPASy Swiss-Prot
Match: DYL1_CHLRE (Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.948e-12 Identity = 38/85 (44.71%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 3 KAVIGETDMLETMQQXXXXXXXXXXXXXXVTEPTEIARFIKKEFDKAYGTGWQCIVGTDFGSFVTHCYGNFIYFRVGSLAILLFR 257 KAVI DM E MQ + + +IA +IKKEFD+ + W CIVG +FGS+VTH +FIYF +G +AILLF+ Sbjct: 7 KAVIKNADMSEEMQADAVDCATQALEKYNIEK--DIAAYIKKEFDRKHNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFK 89
BLAST of FC873097 vs. ExPASy Swiss-Prot
Match: DYL1_EMENI (Dynein light chain, cytoplasmic OS=Emericella nidulans GN=nudG PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11 Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 3 Query: 12 IGETDMLETMQQXXXXXXXXXXXXXXVTEPTEIARFIKKEFDKAYGTGWQCIVGTDFGSFVTHCYGNFIYFRVGSLAILLFR 257 I DM E MQQ + + +IA++IK+EFD G W C+VG +FGSFVTH +FIYF +G AILLF+ Sbjct: 13 IKSVDMSEDMQQEAVEVAIEAMEKYHIEK--DIAQYIKREFDSRKGATWHCVVGRNFGSFVTHETKHFIYFYLGHCAILLFK 92
BLAST of FC873097 vs. ExPASy Swiss-Prot
Match: DYL2_SCHMA (Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.365e-11 Identity = 36/85 (42.35%), Postives = 47/85 (55.29%), Query Frame = 3 Query: 3 KAVIGETDMLETMQQXXXXXXXXXXXXXXVTEPTEIARFIKKEFDKAYGTGWQCIVGTDFGSFVTHCYGNFIYFRVGSLAILLFR 257 KAVI DM E MQ+ + + ++A +IKKEFD+ Y W CIVG FGS+VTH +FIYF + A LLF+ Sbjct: 5 KAVIKNADMHEDMQETAVHTAAAALDKYEIEK--DVAAYIKKEFDRKYNPNWHCIVGKHFGSYVTHETQHFIYFYLQERAFLLFK 87
BLAST of FC873097 vs. ExPASy Swiss-Prot
Match: DYL_DICDI (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum GN=dlcB PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.446e-11 Identity = 30/51 (58.82%), Postives = 35/51 (68.63%), Query Frame = 3 Query: 105 EIARFIKKEFDKAYGTGWQCIVGTDFGSFVTHCYGNFIYFRVGSLAILLFR 257 +IA IKKEFDK Y W CIVG FGSFVTH NFIYF + ++LLF+ Sbjct: 39 DIAMIIKKEFDKKYSPTWHCIVGKSFGSFVTHETKNFIYFNINKHSVLLFK 89 The following BLAST results are available for this feature:
BLAST of FC873097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873097 ID=FC873097; Name=FC873097; organism=Citrus clementina; type=EST; length=514bpback to top |