FC873100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_BACFR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis GN=ispG PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.911e-21 Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADCFDKIRVNPGNFAD 651 RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I L Y +PLVAD+HF+P VA A +K+R+NPGN+ D Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKEAENLMNINIGLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVD 117
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_PSEAE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas aeruginosa GN=ispG PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.762e-20 Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 304 SIHKT---VRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 SIH +RRK++ + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+VR++V A+A +IK + N+PLVADIHF +ALRVA+ D +R+NPGN Sbjct: 2 SIHSASPIIRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIVRVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGN 113
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_PSEAB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ispG PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.762e-20 Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 304 SIHKT---VRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 SIH +RRK++ + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+VR++V A+A +IK + N+PLVADIHF +ALRVA+ D +R+NPGN Sbjct: 2 SIHSASPIIRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIVRVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGN 113
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_PSEA8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=ispG PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.762e-20 Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 304 SIHKT---VRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 SIH +RRK++ + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+VR++V A+A +IK + N+PLVADIHF +ALRVA+ D +R+NPGN Sbjct: 2 SIHSASPIIRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIVRVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGN 113
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_BACFN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=ispG PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.762e-20 Identity = 48/110 (43.64%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADCFDKIRVNPGNFAD 651 RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I L Y +PLVAD+HF P VA A +K+R+NPGN+ D Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKEAENLMNINIGLRSTGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVD 117
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_PORGI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Porphyromonas gingivalis GN=ispG PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.302e-20 Identity = 49/110 (44.55%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADCFDKIRVNPGNFAD 651 RRKT +G+ +G + PIR+Q+M T D +V++ RI D GAD VR T QG REA I L + Y+IPLVADIHF+P A +K+R+NPGNF + Sbjct: 9 RRKTSVAQIGDTPLGGDFPIRIQSMANVSTMDTQASVDQAARIIDAGADYVRFTAQGVREAVNLQHIHAGLCRLGYHIPLVADIHFSPKAAEEALLHVEKVRINPGNFVE 118
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_PARD8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ispG PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.302e-20 Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADCFDKIRVNPGNFAD 651 RRK+ +G+ +G E+PIR+Q+M T D V + +R+ + GA+ VR T QG+REA EI+ L ++ Y PLVADIHF P A A +K+R+NPGN+ D Sbjct: 8 RRKSSVAQIGDTPMGGENPIRIQSMANVSTMDTEAAVAQAIRMIEAGAEYVRFTAQGEREARNLGEIRKQLNEQGYTTPLVADIHFNPRAADAAAGEVEKVRINPGNYVD 117
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_PSEA7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=ispG PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 55/117 (47.01%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 304 SIHKT---VRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 SIH RRK++ + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+VR++V A+A +IK + N+PLVADIHF +ALRVA+ D +R+NPGN Sbjct: 2 SIHSASPITRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIVRVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGN 113
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_SYNPX (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain WH8102) GN=ispG PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.128e-20 Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 289 QKYCESIHKTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNF 645 ++Y IH RR T+TVMVG+VAIGS+HP+ VQ+M DT D+ V ++R+A+ G+++VR+T A A EI+ + + +PLVAD+H +A+ VA DK+R+NPG F Sbjct: 6 RRYDTQIH---RRITRTVMVGDVAIGSDHPVVVQSMINEDTLDIDAAVAGIVRLAEAGSEIVRVTTPSMAHARAMGEIRAAVRARGCTVPLVADVHHNGVKIAMEVAQHVDKVRINPGLF 122
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ispG PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.128e-20 Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 286 RQKYCESIHKTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNF 645 +Q Y E ++ RR T+TV VGNV IGS+HP+ VQ+M DT D+ V + R+ + G+++VR+TV A A I++ L+Q +PLVAD+H +AL VA DK+R+NPG F Sbjct: 12 QQPYPEPVYP--RRPTRTVAVGNVLIGSQHPVVVQSMINEDTLDIDAAVAAIRRLHEAGSEIVRVTVPSMAHAKAMEAIRSKLIQTYKPVPLVADVHHNGIKIALEVAQYVDKVRINPGLF 130 The following BLAST results are available for this feature:
BLAST of FC873100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873100 ID=FC873100; Name=FC873100; organism=Citrus clementina; type=EST; length=652bpback to top |