FC873100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_ARTS2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Arthrobacter sp. (strain FB24) GN=ispG PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14 Identity = 39/108 (36.11%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RRKT+ + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +A+A ++ + IP++ADIHF P + +RVNPGN Sbjct: 19 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADDAEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN 121
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_ARTCA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=ispG PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14 Identity = 39/108 (36.11%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RRKT+ + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +A+A ++ + IP++ADIHF P + +RVNPGN Sbjct: 19 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADDAEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN 121
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_ARTAT (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Arthrobacter aurescens (strain TC1) GN=ispG PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.445e-14 Identity = 39/108 (36.11%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RRKT+ + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +A+A ++ + IP++ADIHF P + +RVNPGN Sbjct: 19 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADDAEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN 121
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_THESQ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermotoga sp. (strain RQ2) GN=ispG PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.887e-14 Identity = 44/106 (41.51%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 334 QTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVA-LRVADCFDKIRVNPGNFA 648 ++V VGNV IG P+ VQ+MTT T DV T+ ++ R+ G +++R+ VQ + +A A IK + IPLVADI F +A L + + DKIR+NPGN + Sbjct: 3 KSVKVGNVVIGGGAPVSVQSMTTTKTADVERTISQIKRLERAGCEIIRVAVQDEEDAKAIRRIKEQI-----EIPLVADIQFDYRLAILSIDNGADKIRINPGNMS 103
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_THEP1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=ispG PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.887e-14 Identity = 44/106 (41.51%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 334 QTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVA-LRVADCFDKIRVNPGNFA 648 ++V VGNV IG P+ VQ+MTT T DV T+ ++ R+ G +++R+ VQ + +A A IK + IPLVADI F +A L + + DKIR+NPGN + Sbjct: 3 KSVKVGNVVIGGGAPVSVQSMTTTKTADVERTISQIKRLERAGCEIIRVAVQDEEDAKAIRRIKEQI-----EIPLVADIQFDYRLAILSIDNGADKIRINPGNMS 103
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_GLOVI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Gloeobacter violaceus GN=ispG PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.887e-14 Identity = 45/110 (40.91%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 319 VRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNF 645 +RR T+ V VG + IG P+ VQ+M DT D G V + + G +LVR+TV A A I+ TL +PLVAD+H +AL VA DK+R+NPG F Sbjct: 14 LRRVTRPVQVGALTIGGNAPVVVQSMINEDTLDTPGAVAAIRALHKAGCELVRVTVPSLAHARALERIRKTLEDTYRPVPLVADVHHDGGPIALEVARHVDKVRINPGLF 123
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_DEIRA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Deinococcus radiodurans GN=ispG PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.887e-14 Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR----VADCFDKIRVNPGN 642 RR+T +V VG V +GS HPI VQ+MT DT + T +V ++A G+++VR+TV + A A E+ L ++P+V D H+ + LR A K R+NPGN Sbjct: 25 RRQTVSVNVGGVMVGSAHPIVVQSMTNTDTANAEATAIQVAQLARAGSEIVRVTVNTREAAAAVPELVQRLADIGVHVPIVGDFHYNGHLLLREYPETARLLAKYRINPGN 135
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_CAMFF (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=ispG PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.887e-14 Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADCFDKIRVNPGN 642 R T+ ++VGNV IG + PI VQ+MT T+DV +E++ R+ G D+VR V K + ++K K +P+VADIHF S A+ V+ D IR+NPGN Sbjct: 3 RYPTKQILVGNVKIGGDAPISVQSMTFAKTRDVKECLEQINRLYFAGCDIVRCAVFNKEDIVGLEQVK-----KESPLPIVADIHFNYSYAVAVSKFVDAIRINPGN 104
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_BAUCH (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=ispG PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.887e-14 Identity = 44/111 (39.64%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGNFAD 651 RRK++ + VGNV IG PI VQ+MT T +V TV ++ + GAD+VR++V A+ + L+++ ++PLVADIHF +AL+VA + +R+NPGN + Sbjct: 8 RRKSKRIYVGNVPIGDGAPIAVQSMTNTQTTNVIATVNQIKALERLGADIVRVSVPTLHAAE-----QFKLIKEQVDVPLVADIHFDYRIALKVAKYGVNCLRINPGNIGN 113
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_ZYMMO (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Zymomonas mobilis GN=ispG PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.465e-14 Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADCFDK-IRVNPGN 642 RRK++ +MVGNVA+G + PI VQTMT T D T+ ++ R G DL+R++ K A +I +P++ADIHF AL AD +R+NPGN Sbjct: 11 RRKSRKIMVGNVAVGGDAPISVQTMTNTPTVDAQATIAQIKRCEAVGVDLIRVSCPDKESTAALKDIVRAA-----EVPIIADIHFHYKRALEAADAGAACLRINPGN 113 The following BLAST results are available for this feature:
BLAST of FC873100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873100 ID=FC873100; Name=FC873100; organism=Citrus clementina; type=EST; length=652bpback to top |