FC873100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_BRUSI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=ispG PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.223e-13 Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = 1 Query: 310 HKTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVADCFDKIRVNPGN 642 H RR++ V VG V +G P+ VQ+MT DT DV TV +V+ + G+++VRITV A A +I+ L + +++PLV D H+ L A+ K R+NPGN Sbjct: 11 HPFPRRQSVGVSVGGVIVGGSAPVVVQSMTNTDTADVDSTVAQVVALHRAGSEIVRITVDRDESAAAVPKIRERLERLGHDVPLVGDFHYIGHKLLADHPACAEALAKYRINPGN 125
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_BRUAB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Brucella abortus GN=ispG PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.223e-13 Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 310 HKTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVADCFDKIRVNPGN 642 H RR++ V VG V +G P+ VQ+MT DT DV TV +V + G+++VRITV A A +I+ L + +++PLV D H+ L A+ K R+NPGN Sbjct: 11 HPFPRRQSVGVSVGGVIVGGSAPVVVQSMTNTDTADVDSTVAQVAALHRAGSEIVRITVDRDESAAAVPKIRERLERLGHDVPLVGDFHYIGHKLLADHPACAEALSKYRINPGN 125
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_BRUA2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Brucella abortus (strain 2308) GN=ispG PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.223e-13 Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 310 HKTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVADCFDKIRVNPGN 642 H RR++ V VG V +G P+ VQ+MT DT DV TV +V + G+++VRITV A A +I+ L + +++PLV D H+ L A+ K R+NPGN Sbjct: 11 HPFPRRQSVGVSVGGVIVGGSAPVVVQSMTNTDTADVDSTVAQVAALHRAGSEIVRITVDRDESAAAVPKIRERLERLGHDVPLVGDFHYIGHKLLADHPACAEALSKYRINPGN 125
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_BRUA1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Brucella abortus (strain S19) GN=ispG PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.223e-13 Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 310 HKTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVADCFDKIRVNPGN 642 H RR++ V VG V +G P+ VQ+MT DT DV TV +V + G+++VRITV A A +I+ L + +++PLV D H+ L A+ K R+NPGN Sbjct: 11 HPFPRRQSVGVSVGGVIVGGSAPVVVQSMTNTDTADVDSTVAQVAALHRAGSEIVRITVDRDESAAAVPKIRERLERLGHDVPLVGDFHYIGHKLLADHPACAEALSKYRINPGN 125
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_CAMLR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=ispG PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.598e-13 Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADCFDKIRVNPGN 642 R KT+ + VG+V IG + PI VQ+M T+DV G +E++ R+ GA++VR+ +A A EIK +PL+ DIHF +A+ A+ D +R+NPGN Sbjct: 5 RYKTRQIKVGDVLIGGDAPISVQSMLFTKTRDVEGCLEQLNRLYFAGANIVRLACLDMADARALKEIK-----AKSPLPLIVDIHFNHKLAVFCAEFIDGVRINPGN 106
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG2_STRCO (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2 OS=Streptomyces coelicolor GN=ispG2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.598e-13 Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RRK++ + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +ADA ++ + IP++ADIHF P + +RVNPGN Sbjct: 18 RRKSRQIQVGPVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDDADAL-----PVIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN 120
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_XYLFT (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ispG PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.087e-13 Identity = 39/111 (35.14%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVADCFDKIRVNPGN 642 RR TQ V +G++ +G HP+ VQ+MT DT DV + ++V + G+++VR+TV + A A I L +PL+ D H+ L A+ K R+NPGN Sbjct: 15 RRLTQAVNIGHLTVGGGHPVVVQSMTNTDTADVVASTKQVAELWRAGSEMVRLTVNNAQSAAAIPRIAERLAMMGIEVPLIGDFHYNGHQLLADEPACAEVLAKYRINPGN 125
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_STRMK (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Stenotrophomonas maltophilia (strain K279a) GN=ispG PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.087e-13 Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRV----ADCFDKIRVNPGN 642 RR+T V +G V +G P+ VQ+MT DT DVA +V++V + G+++VR+TV A A I + L ++PL+ D H+ L A+ K R+NPGN Sbjct: 19 RRQTHAVQIGGVTVGGGKPVVVQSMTNTDTSDVASSVKQVAELWRAGSEMVRLTVNTVEAAAAIPRIVDKLAMMGIDVPLIGDFHYNGHQLLTAEPACAEALAKYRINPGN 129
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_STRM5 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Stenotrophomonas maltophilia (strain R551-3) GN=ispG PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.087e-13 Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRV----ADCFDKIRVNPGN 642 RR+T V +G V +G P+ VQ+MT DT DVA +V++V + G+++VR+TV A A I + L ++PL+ D H+ L A+ K R+NPGN Sbjct: 19 RRQTHAVQIGGVTVGGGKPVVVQSMTNTDTSDVASSVKQVAELWRAGSEMVRLTVNTVEAAAAIPRIVDKLAMMGIDVPLIGDFHYNGHQLLTAEPACAEALAKYRINPGN 129
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_OLICO (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=ispG PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.087e-13 Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVADCFDKIRVNPGN 642 R +T V VGNV +G PI VQ+MT DT D+ TV++V +A G+++VRITV + A A I+ L + ++PL+ D H+ L A K R+NPGN Sbjct: 24 RHQTVQVTVGNVKVGGGAPIVVQSMTNTDTADIDSTVKQVAALARAGSEMVRITVDREEAAAAVPHIREKLDKLGVDVPLIGDFHYIGHKLLSEYPACAAALAKYRINPGN 134 The following BLAST results are available for this feature:
BLAST of FC873100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873100 ID=FC873100; Name=FC873100; organism=Citrus clementina; type=EST; length=652bpback to top |