FC873100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_SACD2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=ispG PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.324e-19 Identity = 52/108 (48.15%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RRK++ +MVG+VA+G + PI +Q+MT +T DV TV ++ RI GAD+VR++V A+A I+ K +IPLVADIHF +ALRVAD D +R+NPGN Sbjct: 9 RRKSRQIMVGDVAVGGDAPITIQSMTNTETTDVEATVAQIERIQMAGADIVRVSVPSMDAAEAFGAIR-----KRVSIPLVADIHFDYRIALRVADLGVDCLRINPGN 111
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_ALCBS (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=ispG PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.669e-19 Identity = 51/111 (45.95%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 313 KTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAD-CFDKIRVNPGN 642 K RRKT+ VMVGNV +G + PI VQ+MT ++T DV TV ++ R+ D G D+VR++V A+A +I+ K ++PLVADIH+ +AL VA+ D +R+NPGN Sbjct: 6 KIERRKTRQVMVGNVPVGGDAPISVQSMTNSETCDVDATVGQIRRLQDAGVDIVRVSVPSMEAAEAFGKIR-----KQVDVPLVADIHYDYKIALAVAEQGVDCLRINPGN 111
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_THETN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermoanaerobacter tengcongensis GN=ispG PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.263e-18 Identity = 48/109 (44.04%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 319 VRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR-VADCFDKIRVNPGN 642 +R+ T+ + +GN IG +PI VQ+MT DT DV TVE++ R+ ++G D++R+ V ++ A + EIK K+ NIPLVADIHF +A++ + + DKIR+NPGN Sbjct: 4 MRKLTREIKIGNKKIGGNNPILVQSMTNTDTHDVEKTVEQIKRLEEEGCDIIRVAVPDEKAAYSIKEIK-----KHINIPLVADIHFDYRLAIKSIENGADKIRINPGN 107
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_BACCR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ispG PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.263e-18 Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 316 TVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR-VADCFDKIRVNPGN 642 T R KT+ V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +R ADA +IK K NIPLVADIHF +AL+ + DK+R+NPGN Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGN 109
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_BACC4 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain B4264) GN=ispG PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.263e-18 Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 316 TVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR-VADCFDKIRVNPGN 642 T R KT+ V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +R ADA +IK K NIPLVADIHF +AL+ + DK+R+NPGN Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGN 109
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_BACC2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain G9842) GN=ispG PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.263e-18 Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 316 TVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR-VADCFDKIRVNPGN 642 T R KT+ V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +R ADA +IK K NIPLVADIHF +AL+ + DK+R+NPGN Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGN 109
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. GN=ispG PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.650e-18 Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 286 RQKYCESIHKTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPGNF 645 +Q Y E ++ RR T+TV V +V IGS+HP+ VQ+M DT DV V + R+ + G+++VR+TV A A I+ L+Q +PLVAD+H +AL VA DK+R+NPG F Sbjct: 12 QQPYPEPVYP--RRPTRTVAVADVLIGSQHPVVVQSMINEDTLDVDAAVAGIRRLHEAGSEIVRVTVPSMAHAKAMEAIREKLIQTYKPVPLVADVHHNGIKIALEVAKYVDKVRINPGLF 130
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_SYNP2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ispG PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.154e-18 Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPG 639 RRKT+ V VGNV IGS++P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A + +IK L + +P+VAD+H +AL VA DK+R+NPG Sbjct: 21 RRKTRAVKVGNVTIGSDYPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSMAHARSLAQIKAKLAETYQAVPIVADVHHNGMKIALEVAKHVDKVRINPG 127
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_RUTMC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=ispG PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.154e-18 Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RRK++ V VG+VAIG + PI VQ+MT +T DV TV ++ I + GADLVR++V A+A F+I ++K NIPL++DIHF +AL+VA+ D +R+NPGN Sbjct: 9 RRKSKQVFVGDVAIGGDAPISVQSMTNTETTDVKATVAQIQAIQNAGADLVRVSVPTIDAAEA-FKI----IKKQVNIPLISDIHFDYKIALKVAEYGADCLRINPGN 111
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_COLP3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=ispG PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.154e-18 Identity = 51/112 (45.54%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 319 VRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGNFAD 651 +RR ++ +MVGNV +G + PI VQ+MT T DVA TV ++ + GAD+VR++V A+A EIK K N+PLVADIHF +AL+VA+ D +R+NPGN + Sbjct: 8 IRRVSRQIMVGNVPVGGDAPITVQSMTNTLTTDVAATVAQIKALEAVGADIVRVSVPTMDAAEAFREIK-----KQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGN 114 The following BLAST results are available for this feature:
BLAST of FC873100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873100 ID=FC873100; Name=FC873100; organism=Citrus clementina; type=EST; length=652bpback to top |