FC873100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_BEII9 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=ispG PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.351e-11 Identity = 41/102 (40.20%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 349 GNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVADCFDKIRVNPGN 642 G+V +G PI VQ+MT DT D+ TVE+V +A G++LVRITV A A I+ L + +PLV D H+ L A+ K R+NPGN Sbjct: 37 GSVQVGGGAPIVVQSMTNTDTADIDSTVEQVAALARAGSELVRITVDRDPAAAAVPYIREKLDKMGCLVPLVGDFHYIGHRLLTEYPACAEALAKYRINPGN 138
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_SALTO (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ispG PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.682e-11 Identity = 35/108 (32.41%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RR ++ +MVG+V +G P+ VQ+MTT T DV T++++ + G +VR+ V + + A + + +P++ADIHF P + +RVNPGN Sbjct: 19 RRASRQIMVGSVPVGGGAPVSVQSMTTTLTADVNATLQQIAELTAAGCQIVRVAVPSQDDVAAL-----PAIARKSQLPVIADIHFQPRYVFAAIEAGCAAVRVNPGN 121
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_LARHH (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=ispG PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.682e-11 Identity = 42/111 (37.84%), Postives = 55/111 (49.55%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR-VADC---FDKIRVNPGN 642 RR + +G+V +G P+ VQ+MT DT D A T +V + G+++VRITV A EI+ L PLV D HF LR DC K R+NPGN Sbjct: 8 RRVCRQARIGHVLMGGTAPVVVQSMTNTDTADAAATALQVFDLWQAGSEVVRITVNSPEAAARVAEIRLRLDDMGCTAPLVGDFHFNGDRLLRDYPDCARALAKYRINPGN 118
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_RALPJ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Ralstonia pickettii (strain 12J) GN=ispG PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11 Identity = 38/100 (38.00%), Postives = 53/100 (53.00%), Query Frame = 1 Query: 355 VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR----VADCFDKIRVNPGN 642 V +G + P+ VQ+MT DT D GT +V +A G++LVRITV A A I+ L + ++PLV D H+ L+ A K R+NPGN Sbjct: 34 VHVGGDAPVCVQSMTNTDTSDAIGTAIQVKELARAGSELVRITVDTPAAAAAVPAIREQLDRMGVDVPLVGDFHYNGHKLLQDYPECAQALSKYRINPGN 133 The following BLAST results are available for this feature:
BLAST of FC873100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873100 ID=FC873100; Name=FC873100; organism=Citrus clementina; type=EST; length=652bpback to top |