FC873100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_ANASP (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=ispG PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.799e-18 Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPG 639 RRKT+ V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EIK L++ ++P+VAD+H +AL VA +K+R+NPG Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAHAVALAEIKQKLIKTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPG 131
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_THEEB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispG PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.268e-18 Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 319 VRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPG 639 VRRKT+ V +G+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EI++ L + +PLVAD+H +AL VA D +R+NPG Sbjct: 18 VRRKTRPVPIGSVVIGGGHPVAVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSLAHAKAMEEIRDRLYKTYKPVPLVADVHHNGMKIALEVAKYVDNVRINPG 125
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_RHOPB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=ispG PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.268e-18 Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVADCFDKIRVNPGN 642 R KT VMVG+VA+G PI VQ+MT DT DVAGTVE+V + G++LVRITV + A A I++ L ++ PL+ D H+ L A+ DK R+NPGN Sbjct: 18 RHKTTQVMVGDVAVGGGAPIVVQSMTNTDTADVAGTVEQVAALTRAGSELVRITVDREEAAAAVPHIRDALRKRGITTPLIGDFHYIGHKLLADYPACAEALDKYRINPGN 128
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_NOSP7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispG PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.268e-18 Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPG 639 RRKT+ V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EIK L++ ++P+VAD+H +AL V+ +K+R+NPG Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSMAHAKALAEIKQKLIKTYQDVPIVADVHHNGLKIALEVSKHIEKVRINPG 131
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_MARMS (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Marinomonas sp. (strain MWYL1) GN=ispG PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.268e-18 Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGNFAD 651 RR ++ +MVGNV +G PI VQ+MT +T DV TV ++ IAD GAD+VR+++ A+A +I+ + +IPLVADIHF +AL+VA+ D +R+NPGN + Sbjct: 9 RRHSRQIMVGNVPVGGGAPISVQSMTNTETCDVDATVAQIRAIADAGADIVRVSIPSMDAAEAFKKIREAV-----SIPLVADIHFDYKIALKVAEYGVDCLRINPGNIGN 114
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_CYAP7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Cyanothece sp. (strain PCC 7424) GN=ispG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.186e-18 Identity = 46/107 (42.99%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPG 639 RRKT+ V VG++ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EIK L++ +PLVAD+H +AL VA DK+R+NPG Sbjct: 23 RRKTRGVKVGDITIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSMAHAKALAEIKEKLIKTYKAVPLVADVHHNGMKIALEVAKHVDKVRINPG 129
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_CYAA5 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=ispG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.186e-18 Identity = 49/125 (39.20%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 268 SPLLIPRQKYCESIHKTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPG 639 +P + ++ +IH RRKT+ V VG++ IG P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A IK L Q +PLVAD+H +AL VA DK+R+NPG Sbjct: 6 TPQTTSKPEFDTTIH---RRKTRPVKVGDITIGGGFPVVVQSMINEDTLDIEGSVSAIRRLHEMGCEIVRVTVPSMAHAKALATIKEKLAQVYQPVPLVADVHHNGLKIALEVAKHVDKVRINPG 127
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_ANOFW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=ispG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.186e-18 Identity = 52/115 (45.22%), Postives = 70/115 (60.87%), Query Frame = 1 Query: 301 ESIHKTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR-VADCFDKIRVNPGN 642 E IH R KT+ V VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+ +R ADA EIK K NIPLV DIHF +AL+ + + DKIR+NPGN Sbjct: 3 EIIH---RSKTRPVRVGNITIGGNNEVVIQSMTTTKTHDVDATVAQIHRLEEAGCQIVRVACPDERAADAIAEIK-----KRINIPLVVDIHFDYRLALKAIENGADKIRINPGN 109
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_ANAVT (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.186e-18 Identity = 46/107 (42.99%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPG 639 RRKT+ V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A EIK L+ ++P+VAD+H +AL VA +K+R+NPG Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAHAVALAEIKQKLITTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPG 131
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_ACAM1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=ispG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.186e-18 Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPG 639 RRKT+ V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV A A IK L +PLVAD+H +AL VA DK+R+NPG Sbjct: 24 RRKTRPVPVGDVIIGGGHPVVVQSMINEDTLDIEGSVAAIRRLHELGCEIVRVTVPSMAHAKALATIKEKLTATYQTVPLVADVHHNGMKIALEVAKHVDKVRINPG 130 The following BLAST results are available for this feature:
BLAST of FC873100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873100 ID=FC873100; Name=FC873100; organism=Citrus clementina; type=EST; length=652bpback to top |