FC873100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_PSEHT (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=ispG PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.824e-17 Identity = 52/108 (48.15%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V A+A IK + IPLVADIHF +AL+VA D +R+NPGN Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVGATVAQIQAIQDAGADIVRVSVPTMDAAEAFKSIK-----EQVTIPLVADIHFDYRIALKVAKYGVDCLRINPGN 111
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_PSE14 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ispG PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.824e-17 Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RR+++ + VG+V +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V A+A IK + +PLVADIHF +ALRVA+ D +R+NPGN Sbjct: 9 RRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGRIKQLV-----KVPLVADIHFDYRIALRVAELGVDCLRINPGN 111
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_NOCFA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nocardia farcinica GN=ispG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGNFAD 651 RRKT+ +MVG+V +GS+HP+ VQ+MTT T DV T++++ ++ G D+VR+ + +ADA + K IP++ADIHF P D +RVNPGN + Sbjct: 20 RRKTRQLMVGSVGVGSDHPVSVQSMTTTKTHDVNATLQQIAQLTASGCDIVRVACPRQEDADAL-----ATIAKKSQIPVIADIHFQPRYIFAAIDAGCAAVRVNPGNIKE 125
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_METCA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Methylococcus capsulatus GN=ispG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVAL----RVADCFDKIRVNPGN 642 R++T V VG+V IG PI VQ+MT DT DVAGTV +V+ +A G++LVRITV + A+A I+ L ++ N+PLV D HF L A+ K R+NPGN Sbjct: 4 RKQTVGVRVGSVRIGGGAPIVVQSMTNTDTADVAGTVRQVIDLARAGSELVRITVNNEEAAEAVPRIREELDRQGCNVPLVGDFHFNGHKLLDKYPACAEALGKFRINPGN 114
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_GEOSW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Geobacillus sp. (strain WCH70) GN=ispG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 52/115 (45.22%), Postives = 70/115 (60.87%), Query Frame = 1 Query: 301 ESIHKTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALR-VADCFDKIRVNPGN 642 E IH R KT+ V VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+ +R A+A EIK K NIPLVADIHF +AL+ + DKIR+NPGN Sbjct: 3 EIIH---RSKTRPVRVGNLTIGGNNEVIIQSMTTTKTHDVEATVAQIKRLEEAGCQIVRVACPDERAANAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGADKIRINPGN 109
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_CORU7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=ispG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 44/111 (39.64%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGNFAD 651 RRKT+ +MVG+V +GSEHPI VQ+MTT T D+ T++++ ++ G D+VR+ R+A+A ++ K IP++ADIHF P + + +RVNPGN + Sbjct: 19 RRKTRQLMVGDVGVGSEHPISVQSMTTTKTHDINATLQQIAQLTASGCDIVRVACPKPRDAEAL-----PIIAKKSPIPVIADIHFQPRYIFQAIEAGCAAVRVNPGNIKE 124
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_CHRSD (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=ispG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVADC-FDKIRVNPGN 642 RRK++ + VG+V +G + PI VQ+MT DT DV TV ++ ++ GAD+VR++V A+A +IK + ++PLVADIHF +ALRVA+ D +R+NPGN Sbjct: 9 RRKSRQIHVGHVPVGGDAPIAVQSMTNTDTLDVDATVAQIRQLEAAGADIVRVSVPTMDAAEAFGQIK-----RQVSVPLVADIHFDYKIALRVAELGVDCLRINPGN 111
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_ACIF5 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=ispG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 49/108 (45.37%), Postives = 68/108 (62.96%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRV-ADCFDKIRVNPGN 642 RRKT+ + VG VAIG + PI VQ+MT +T+D+A TV ++ R+ GAD+VRI+V A+A ++ PLVADIHF +AL+V D D +R+NPGN Sbjct: 9 RRKTRQIHVGKVAIGGDAPISVQSMTNTETRDIAATVAQIRRLEAVGADIVRISVPSMDAAEAF-----KTIRAQVETPLVADIHFDHRIALQVMEDGVDGLRINPGN 111
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_ACIF2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=ispG PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 49/108 (45.37%), Postives = 68/108 (62.96%), Query Frame = 1 Query: 322 RRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRV-ADCFDKIRVNPGN 642 RRKT+ + VG VAIG + PI VQ+MT +T+D+A TV ++ R+ GAD+VRI+V A+A ++ PLVADIHF +AL+V D D +R+NPGN Sbjct: 9 RRKTRQIHVGKVAIGGDAPISVQSMTNTETRDIAATVAQIRRLEAVGADIVRISVPSMDAAEAF-----KTIRAQVETPLVADIHFDHRIALQVMEDGVDGLRINPGN 111
BLAST of FC873100 vs. ExPASy Swiss-Prot
Match: ISPG_TRIEI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Trichodesmium erythraeum (strain IMS101) GN=ispG PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.111e-17 Identity = 50/132 (37.88%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 247 LQPASERSPLLIPRQKYCESIHKTVRRKTQTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHF-APSVALRVADCFDKIRVNPG 639 +Q + S I + + +IH RRKT++V VG++ IG HP+ VQ+M DT D+ +V + R+ + G ++VR+TV A + EIK L + +PLVAD+H +AL VA DK+R+NPG Sbjct: 1 MQTLANPSKTPINQAVFDTTIH---RRKTRSVKVGDITIGGGHPVVVQSMINEDTLDIERSVAAIRRLHEIGCEIVRVTVPSIAHAKSLGEIKQKLAETYKPVPLVADVHHNGMKIALEVAKQVDKVRINPG 129 The following BLAST results are available for this feature:
BLAST of FC873100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873100 ID=FC873100; Name=FC873100; organism=Citrus clementina; type=EST; length=652bpback to top |