FC873106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 8.114e-73 Identity = 134/161 (83.23%), Postives = 150/161 (93.17%), Query Frame = 1 Query: 238 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 DD+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRAV T++A++FAEK F+ETSAL+S NVE AF Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 273.478 bits (698), Expect = 8.114e-73 Identity = 134/161 (83.23%), Postives = 150/161 (93.17%), Query Frame = 1 Query: 238 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 DD+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRAV T++A++FAEK F+ETSAL+S NVE AF Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.060e-72 Identity = 135/165 (81.82%), Postives = 151/165 (91.52%), Query Frame = 1 Query: 226 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 A R D++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++V+ + VKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH DSNIVIML+GNK DL+HLRAV+TEDAQS+AEKE F+ETSALE+LNVE AF Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAF 166
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 271.166 bits (692), Expect = 4.027e-72 Identity = 133/161 (82.61%), Postives = 149/161 (92.55%), Query Frame = 1 Query: 238 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 DD+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRAV T++A++FAEK F+ETSAL+ NVE AF Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAF 165
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 6.429e-70 Identity = 127/165 (76.97%), Postives = 148/165 (89.70%), Query Frame = 1 Query: 226 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 A R D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++V+ K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM+ GNK+DL+HLRAVS ED Q+ AEKE F+ETSALE++N+E AF Sbjct: 2 ANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAF 166
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.068e-68 Identity = 124/165 (75.15%), Postives = 146/165 (88.48%), Query Frame = 1 Query: 226 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 A+R D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++V+ K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM+ GNK+DL HLRAVS +D + +EKE F+ETSALE+ N+E AF Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAF 166
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 258.455 bits (659), Expect = 2.701e-68 Identity = 125/164 (76.22%), Postives = 144/164 (87.80%), Query Frame = 1 Query: 229 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +R D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+ +V+ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM+ GNK+DL HLR+V+ ED QS AEKE F+ETSALE+ NVE AF Sbjct: 3 HRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAF 166
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.287e-67 Identity = 124/165 (75.15%), Postives = 146/165 (88.48%), Query Frame = 1 Query: 226 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 A R D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++V+ K VKAQIWDTAGQERYRAITSAYYRGAVGALL YD+T+ TF+NV+RWL+ELRDH DSNIVI+L GNK+DL+HLRAVS +D Q+ +KE F+ETSALE+LNV+ AF Sbjct: 2 ANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAF 166
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.528e-66 Identity = 122/161 (75.78%), Postives = 144/161 (89.44%), Query Frame = 1 Query: 238 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +D+YDYLFK VLIGDSGVGKSNLL RFT+NEF++ESKSTIGVEFATR+I +D+K +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ +F+NV RWLKELR+H DSNIVIMLVGNK DL HLRAVSTE+AQ+FA + F+ETSA+++ NVE AF Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAF 164
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 251.136 bits (640), Expect = 4.312e-66 Identity = 119/163 (73.01%), Postives = 146/163 (89.57%), Query Frame = 1 Query: 232 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 R D +Y YLFK+VLIGDSGVGKSN+LSRFT+N FSL+SKSTIGVEFAT+S++++ K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELRDH DS+IVIM+VGNK+DL HLRAVS ++ ++ AEKE FF+ETSA+E++NVE AF Sbjct: 4 RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAF 166 The following BLAST results are available for this feature:
BLAST of FC873106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873106 ID=FC873106; Name=FC873106; organism=Citrus clementina; type=EST; length=722bpback to top |