FC873106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.366e-64 Identity = 117/162 (72.22%), Postives = 144/162 (88.89%), Query Frame = 1 Query: 235 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 + ++YDYL+K+VLIGDSGVGKSNLLSRFT+NEFSLE+KSTIGVEFATR+I+ + K +KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+++VERW+ ELR++ D NI IMLVGNK+DLRHLR VST++A+ F+EK K F+ETSAL+S NVE AF Sbjct: 6 SQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAF 167
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 4.934e-62 Identity = 114/157 (72.61%), Postives = 136/157 (86.62%), Query Frame = 1 Query: 250 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 DY+FKVVLIGDS VGKS LL+RF +NEF+L+SK+TIGVEF TR++ +D + VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELR H D NIVIML+GNK+DL LR V TEDA+ FAE+E FFMETSALES NVENAF Sbjct: 16 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAF 172
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.125e-61 Identity = 113/162 (69.75%), Postives = 138/162 (85.19%), Query Frame = 1 Query: 235 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 A+ DY+FKVVLIGDS VGKS +L+RF +NEFSL+SKSTIGVEF TR++ +D K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR+H D NIVI+L+GNK DL + R V TEDA+ FAEKE FF+ETSALE+ NVE+AF Sbjct: 10 ANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAF 171
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 230.72 bits (587), Expect = 6.032e-60 Identity = 108/159 (67.92%), Postives = 136/159 (85.53%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 DYD LFK+VLIGDSGVGKSNLLSRFTKNEF+++SKSTIGVEFATR++ +D K +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+DL HLRAV TE++++FA++ + F ETSAL S NV+ AF Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAF 167
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.877e-60 Identity = 110/162 (67.90%), Postives = 135/162 (83.33%), Query Frame = 1 Query: 235 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 A DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML+GNK DL RAV TEDA+ FA+KE FF+ETSA+E+ N+E+AF Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAF 169
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 229.18 bits (583), Expect = 1.755e-59 Identity = 109/159 (68.55%), Postives = 136/159 (85.53%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 DYDYLFK+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I V++K +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+DL HLRAV T++A++FA + + F ETSAL S NV+ AF Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAF 167
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.310e-58 Identity = 108/162 (66.67%), Postives = 133/162 (82.10%), Query Frame = 1 Query: 235 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 A DY+FKVVLIGDS VGK+ +L+RF +NEFSL+SK+TIGVEF TR++ + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML GNK DL RAV TEDA+ FA+KE FF+ETSA+E+ +E+AF Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAF 169
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.310e-58 Identity = 109/163 (66.87%), Postives = 137/163 (84.05%), Query Frame = 1 Query: 232 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 RA++DY+++FKVVLIG+SGVGK+NLLSRFT+NEFS +S++TIGVEF+TR++ + +KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R V TE+A+ FAE F+ETSAL+S NVE AF Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAF 166
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 5.645e-58 Identity = 110/163 (67.48%), Postives = 135/163 (82.82%), Query Frame = 1 Query: 232 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 R D+DY+++FKVVLIG+SGVGK+NLLSRFT+NEFS +S++TIGVEF+TR++ + VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R V TE+A FAE F+ETSAL+S NVE AF Sbjct: 4 RTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAF 166
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 2.145e-57 Identity = 108/161 (67.08%), Postives = 135/161 (83.85%), Query Frame = 1 Query: 238 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 ++DY+++FKVVLIG+SGVGK+NLLSRFT+NEFS +S++TIGVEF+TR++ + VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R V TE+A+ FAE F+ETSAL+S NVE AF Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAF 166 The following BLAST results are available for this feature:
BLAST of FC873106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873106 ID=FC873106; Name=FC873106; organism=Citrus clementina; type=EST; length=722bpback to top |