FC873106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.802e-57 Identity = 108/161 (67.08%), Postives = 135/161 (83.85%), Query Frame = 1 Query: 238 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 ++DY+++FKVVLIG+SGVGK+NLLSRFT+NEFS +S++TIGVEF+TR++ + VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R V TE+A+ FAE F+ETSAL+S NVE AF Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAF 166
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.391e-56 Identity = 108/165 (65.45%), Postives = 133/165 (80.61%), Query Frame = 1 Query: 235 ADDDY---DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +DDD +YLFK+V+IGDS VGKSNLL+R+ +NEF+ SK+TIGVEF T+S+ +D K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TFENV RWL EL H+D+ + ML+GNK DL +RAVS E+ +S AE E FFMETSAL+S NV+ AF Sbjct: 2 SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAF 166
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.098e-56 Identity = 104/157 (66.24%), Postives = 132/157 (84.08%), Query Frame = 1 Query: 250 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +YLFK+V+IGDS VGKSNLLSR+ +NEFS SK+TIGVEF T+S+ ++ K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TFE+V RWL EL+ H+D+ + MLVGNK DL ++RAVS E+ ++ AE+E FF+ETSAL+S NV+ AF Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAF 166
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.102e-53 Identity = 96/161 (59.63%), Postives = 132/161 (81.99%), Query Frame = 1 Query: 238 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +++ +YLFK+V+IGDS VGKSNLL+RFT+NEF+ ++K+TIGV+F T+SI +D+K + AQ WDTAGQER+RA+TS YYRGAVGA++VYD+T ++F+NV RWL ELR+ + +I+IM+VGNK+DL R V T++AQ+FAE K F+ETSAL S NV +F Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSF 164
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.945e-50 Identity = 92/159 (57.86%), Postives = 128/159 (80.50%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +YDYL K+V+IGDSGVGKSNLLSR+ KNEFS+ STIGVEF+T+++++D+K++K Q+WDTAGQE+Y +IT +YY+GA+GAL+VY++ +F N+E+WLK+ R++ + IMLVGNK+DL+ R VST + + FAEK F+ETSAL+S NVE AF Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAF 165
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.884e-45 Identity = 88/158 (55.70%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IML+GNK DL H RAV+TE+ + FA++ F+ETSA + NVE AF Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAF 160
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.884e-45 Identity = 88/158 (55.70%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IML+GNK DL H RAV+TE+ + FA++ F+ETSA + NVE AF Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAF 160
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.884e-45 Identity = 89/158 (56.33%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D+K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IMLVGNK DL H RAVS E+ + FA++ FME SA + NVE AF Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAF 160
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.460e-45 Identity = 89/158 (56.33%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D+K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IMLVGNK DL H RAVS E+ + FA++ FME SA + NVE AF Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAF 160
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 5.481e-45 Identity = 87/158 (55.06%), Postives = 118/158 (74.68%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 Y+Y+FK ++IGD GVGKS LL +FT+N+F +S TIGVEF TR + V++K +K QIWDTAGQER+RA+T +YYRGA GALLVYD+TR +T+ ++ WL + R+ T+ N VIML+GNK DL R V+ E+A +FA++ F+E+SA NVE AF Sbjct: 5 YEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAF 162 The following BLAST results are available for this feature:
BLAST of FC873106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873106 ID=FC873106; Name=FC873106; organism=Citrus clementina; type=EST; length=722bpback to top |