FC873106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAN_PLAFA (GTP-binding nuclear protein Ran OS=Plasmodium falciparum PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 50/162 (30.86%), Postives = 87/162 (53.70%), Query Frame = 1 Query: 241 DDYDYL--FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 D +Y+ +K++L+GD GVGK+ + R EF + T+GVE + + + +WDTAGQE++ + YY + A++++DV+ +T++NV W +++ I ++LVGNK D++ R V + Q F K + + SA + N E F Sbjct: 2 DSQEYIPQYKLILVGDGGVGKTTFVKRHLTGEFEKKYIPTLGVEVHPLKFQTNFGKTQFNVWDTAGQEKFGGLRDGYYIKSDCAIIMFDVSSRITYKNVPNWYRDI-TRVCETIPMVLVGNKVDVKD-RQVKSRQIQ-FHRKRNLQYYDLSARSNYNFEKPF 160
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: DJ27B_XENLA (DnaJ homolog subfamily C member 27-B OS=Xenopus laevis GN=dnajc27-B PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 48/172 (27.91%), Postives = 90/172 (52.33%), Query Frame = 1 Query: 232 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR---------DHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 R D KV+ +G++ VGKS ++ R+ + F + ++TIG+++ +++ D+ +K I+D AG + + + +Y+ G +LVYDV + +FE+++ WL E++ D+ D NIV + NK D R V + + ++E + + ETSA + F Sbjct: 8 RKDSRKPLRIKVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVQIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFESLDAWLAEMKQELGPQINIDNLD-NIVFAVCANKIDSTKHRCVDESEGRLWSESKGFLYFETSAQSGEGINEMF 178
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAS_SCHPO (Ras-like protein 1 OS=Schizosaccharomyces pombe GN=ras1 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18 Identity = 54/155 (34.84%), Postives = 82/155 (52.90%), Query Frame = 1 Query: 259 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +K+V++GD GVGKS L + ++ F E TI + + +D + + DTAGQE Y A+ Y R G LLVY++T +F+ + + ++ LR ++LV NK DL R VS + + A+ ++ETSA LNVE AF Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAF 162
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RIT2_HUMAN (GTP-binding protein Rit2 OS=Homo sapiens GN=RIT2 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17 Identity = 58/157 (36.94%), Postives = 87/157 (55.41%), Query Frame = 1 Query: 259 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR---DHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +KVV++G GVGKS + +F ++F TI + T+ +R+D++ I DTAGQ + A+ Y RG G ++ Y VT +F+ ++ KEL HT I ++LVGNK DL R VSTE+ S A++ F ETSA +++AF Sbjct: 21 YKVVMLGAGGVGKSAMTMQFISHQFPDYHDPTIEDAYKTQ-VRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKF-KELIFQVRHT-YEIPLVLVGNKIDLEQFRQVSTEEGLSLAQEYNCGFFETSAALRFCIDDAF 174
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAS_CRYNE (Ras-like protein OS=Cryptococcus neoformans GN=RAS1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17 Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = 1 Query: 259 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +K+V++G GVGKS L +F ++ F E TI + + I +D++V + DTAGQE Y A+ Y R G LLVY +T +FE V + ++ LR +++V NK DL + R V + + A++ +ETSA + +NV+ AF Sbjct: 10 YKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCI-IDEEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRSSFEEVSTFHQQILRVKDKDYFPVVVVANKCDLEYERQVQPHEGRDLAKRFNAQCIETSAKQRVNVDEAF 163
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RASL_COLTR (Ras-like protein OS=Colletotrichum trifolii GN=RAS PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17 Identity = 53/155 (34.19%), Postives = 86/155 (55.48%), Query Frame = 1 Query: 259 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +K+V++G GVGKS L + ++ F E TI + + + +D++V + DTAGQE Y A+ Y R G LLVY +T +FE + + ++ LR +++VGNK DL R V+ ++ ++ A+ F+ETSA +NV+ AF Sbjct: 9 YKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCV-IDEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEITTFQQQILRVKDKDYFPMVVVGNKCDLEGEREVTRQEGEALAKSFGCKFIETSAKSRINVDKAF 162
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RALA_DROME (Ras-related protein Ral-a OS=Drosophila melanogaster GN=Rala PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17 Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 1 Query: 256 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKE-LRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 L KV+++G GVGKS L +F +EF +E + + + +D + V+ I DTAGQE Y AI Y+R G L V+ +T +F+ + + ++ LR D +I +LVGNK DL R V + Q A++ ++ETSA NV+ F Sbjct: 11 LHKVIMVGSGGVGKSALTLQFMYDEF-VEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVF 165
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RIT2_RAT (GTP-binding protein Rit2 OS=Rattus norvegicus GN=Rit2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 57/157 (36.31%), Postives = 85/157 (54.14%), Query Frame = 1 Query: 259 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR---DHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +KVV++G GVGKS + +F ++F TI + T+ +R+D++ I DTAGQ + A+ Y RG G ++ Y VT +F+ ++ KEL HT I ++LVGNK DL R VSTE+ + A F ETSA +++AF Sbjct: 21 YKVVMLGAGGVGKSAVTMQFISHQFPDYHDPTIEDAYKTQ-VRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKF-KELIFQVRHT-YEIPLVLVGNKIDLEQFRQVSTEEGMTLARDYNCAFFETSAALRFGIDDAF 174
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RIT2_MOUSE (GTP-binding protein Rit2 OS=Mus musculus GN=Rit2 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 57/157 (36.31%), Postives = 85/157 (54.14%), Query Frame = 1 Query: 259 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR---DHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +KVV++G GVGKS + +F ++F TI + T+ +R+D++ I DTAGQ + A+ Y RG G ++ Y VT +F+ ++ KEL HT I ++LVGNK DL R VSTE+ + A F ETSA +++AF Sbjct: 21 YKVVMLGAGGVGKSAVTMQFISHQFPDYHDPTIEDAYKTQ-VRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKF-KELIFQVRHT-YEIPLVLVGNKIDLEQFRQVSTEEGMNLARDYNCAFFETSAALRFGIDDAF 174
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: DJC27_CHICK (DnaJ homolog subfamily C member 27 OS=Gallus gallus GN=DNAJC27 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 45/158 (28.48%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 262 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 KV+ +G++ VGKS ++ R+ + F + +TIG+++ ++V D+ +K I+D AG + + + +Y+ G +LVYDV + +F+ ++ WL E++ NIV ++ NK D R+V + + +AE + ETSA + F Sbjct: 18 KVISMGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFDALDAWLAEMKQELGPHGNMDNIVFVVCANKIDCTKHRSVDESEGRLWAESRGFLYFETSAQTGEGINEMF 175 The following BLAST results are available for this feature:
BLAST of FC873106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873106 ID=FC873106; Name=FC873106; organism=Citrus clementina; type=EST; length=722bpback to top |