FC873106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: SPI1_SCHPO (GTP-binding nuclear protein spi1 OS=Schizosaccharomyces pombe GN=spi1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17 Identity = 49/154 (31.82%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 259 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 FK+VL+GD G GK+ + R EF + +T+GVE + + +WDTAGQE+ + YY ++++DVT +T++NV W ++L NI I+L GNK D++ + + A +F K+ + + SA + N E F Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVKERKVKA--KAITFHRKKNLQYYDISAKSNYNFEKPF 160
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RIT1_MOUSE (GTP-binding protein Rit1 OS=Mus musculus GN=Rit1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17 Identity = 55/156 (35.26%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 259 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL--RDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +K+V++G GVGKS + +F + F + TI + R IR+DD+ I DTAGQ + A+ Y R G ++ Y +T +F V R K+L R + ++LVGNK+DL+ LR VS E+ S A + F ETSA +++ F Sbjct: 22 YKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEV-REFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVSKEEGLSLAREFSCPFFETSAAYRYYIDDVF 175
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RASU_DICDI (Ras-like protein rasU OS=Dictyostelium discoideum GN=rasU PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17 Identity = 47/153 (30.72%), Postives = 85/153 (55.56%), Query Frame = 1 Query: 262 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 ++ ++GD GVGK+++ +F N F TI + + +DD+V I DTAGQ+ AI + + + G +LVY VT +F+ ++ +L +++ + I+++ NK+DL R V+ ++ ++FA + FME SA LN++ F Sbjct: 16 RLCVMGDGGVGKTSITIQFISNHFVNCYDPTIE-DLYRKQCLIDDQVYMLDILDTAGQDELNAIRNHWIKSCEGFILVYSVTSRSSFDQIQSFLDQIKFLKSEKVPIIMIANKSDLDDERQVTYQEGENFANRFGMSFMEVSAKYKLNIDEVF 167
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: DJC27_PONAB (DnaJ homolog subfamily C member 27 OS=Pongo abelii GN=DNAJC27 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17 Identity = 44/158 (27.85%), Postives = 83/158 (52.53%), Query Frame = 1 Query: 262 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 KV+ +G++ VGKS ++ R+ + F + +TIG+++ + V D+ +K I+D AG + + + +Y+ G +LVYDV + +F+ ++ WL E++ NI+ ++ NK D R V + + +AE + + ETSA + F Sbjct: 18 KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMF 175
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: DJC27_MOUSE (DnaJ homolog subfamily C member 27 OS=Mus musculus GN=Dnajc27 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17 Identity = 44/158 (27.85%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 262 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 KV+ +G++ VGKS ++ R+ + F + +TIG+++ ++V D+ +K I+D AG + + + +Y+ G +LVYDV + +F+ ++ WL E++ NIV ++ NK D R + + + +AE + + ETSA + F Sbjct: 18 KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFFEVRNEFYKDTQGVILVYDVGQKDSFDALDSWLAEMKQELGPHGNMDNIVFVVCANKIDCSKHRCIDESEGRLWAESKGFLYFETSAQTGEGINEMF 175
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: DJC27_HUMAN (DnaJ homolog subfamily C member 27 OS=Homo sapiens GN=DNAJC27 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17 Identity = 44/158 (27.85%), Postives = 83/158 (52.53%), Query Frame = 1 Query: 262 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 KV+ +G++ VGKS ++ R+ + F + +TIG+++ + V D+ +K I+D AG + + + +Y+ G +LVYDV + +F+ ++ WL E++ NI+ ++ NK D R V + + +AE + + ETSA + F Sbjct: 18 KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMF 175
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RASM_RAT (Ras-related protein M-Ras OS=Rattus norvegicus GN=Mras PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 4.835e-17 Identity = 56/156 (35.90%), Postives = 87/156 (55.77%), Query Frame = 1 Query: 259 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLK-ELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALE-SLNVENAF 720 +K+V++GD GVGKS L +F + F + TI + + +D++ + DTAGQE + A+ Y R G L+VY VT +FE+V+R+ + LR + ++LV NK DL HLR V+ + + A K ++ETSA + LNV+ F Sbjct: 14 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHT-EIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTF 168
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RASM_MOUSE (Ras-related protein M-Ras OS=Mus musculus GN=Mras PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.835e-17 Identity = 56/156 (35.90%), Postives = 87/156 (55.77%), Query Frame = 1 Query: 259 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLK-ELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALE-SLNVENAF 720 +K+V++GD GVGKS L +F + F + TI + + +D++ + DTAGQE + A+ Y R G L+VY VT +FE+V+R+ + LR + ++LV NK DL HLR V+ + + A K ++ETSA + LNV+ F Sbjct: 14 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHT-EIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTF 168
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: DJC27_RAT (DnaJ homolog subfamily C member 27 OS=Rattus norvegicus GN=Dnajc27 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.835e-17 Identity = 44/158 (27.85%), Postives = 83/158 (52.53%), Query Frame = 1 Query: 262 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 KV+ +G++ VGKS ++ R+ + F + +TIG+++ ++V D+ +K I+D AG + + + +Y+ G +LVYDV + +F+ ++ WL E++ NIV ++ NK D R + + + +AE + ETSA + F Sbjct: 18 KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFFEVRNEFYKDTQGVILVYDVGQKDSFDALDSWLAEMKQELGPHGNMENIVFVVCANKIDCSKHRCIDESEGRLWAESRGFLYFETSAQTGEGINEMF 175
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: DJC27_BOVIN (DnaJ homolog subfamily C member 27 OS=Bos taurus GN=DNAJC27 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.835e-17 Identity = 45/158 (28.48%), Postives = 83/158 (52.53%), Query Frame = 1 Query: 262 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-----SNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 KV+ +G++ VGKS ++ R+ + F + +TIG+++ ++V D+ +K I+D AG + + + +Y+ G +LVYDV + +F+ ++ WL E++ NIV + NK D R V + + +AE + + ETSA + F Sbjct: 18 KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVQVRDREIKVNIFDMAGDPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDTWLAEMKQDLGPHGNMENIVFAVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMF 175 The following BLAST results are available for this feature:
BLAST of FC873106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873106 ID=FC873106; Name=FC873106; organism=Citrus clementina; type=EST; length=722bpback to top |