FC873106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.720e-44 Identity = 86/158 (54.43%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H+ SN+VIML+GNK+DL R V E+ ++FA + FMETSA + NVE A+ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAY 160
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.720e-44 Identity = 87/158 (55.06%), Postives = 112/158 (70.89%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 Y YLFK ++IGD+GVGKS LL +FT F T+GVEF R I +D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H++SN+VIML+GNK+DL R V E+ ++FA + FMETSA + NVE AF Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR I V + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A+ FAE+ F+E SA NVE+AF Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAF 165
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR I V + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A+ FAE+ F+E SA NVE+AF Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAF 165
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR I V + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A+ FAE+ F+E SA NVE+AF Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAF 165
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR I V + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A+ FAE+ F+E SA NVE+AF Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAF 165
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR I V + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A+ FAE+ F+E SA NVE+AF Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAF 165
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR I V + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR T+ ++ WL + R+ T+ N VI+L+GNKADL R V+ E+A+ FAE+ F+E SA NVE+AF Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAF 165
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.303e-43 Identity = 84/158 (53.16%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 Y +LFK ++IGD+GVGKS LL +FT F TIGVEF R I +D+K +K QIWDTAGQE +R+IT +YYRG+ GALLVYD+TR TF ++ WLK+ R + +SN+ I+L+GNK+D+ RAVS E+ + FA++ F+ETSA + NVE AF Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAF 159
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43 Identity = 85/159 (53.46%), Postives = 116/159 (72.96%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I +D K++K QIWDTAGQER+R ITS+YYRGA G ++VYDVT HV+F NV++W++E++ + ++ +LVGNK DL + V T A+ +A+ F+ETSA S NVE AF Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAF 162 The following BLAST results are available for this feature:
BLAST of FC873106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873106 ID=FC873106; Name=FC873106; organism=Citrus clementina; type=EST; length=722bpback to top |