FC873106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.493e-42 Identity = 84/161 (52.17%), Postives = 119/161 (73.91%), Query Frame = 1 Query: 238 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 + +YDYLFK++LIG+SGVGKS LL RF+ + ++ + STIGV+F +++ +D K VK QIWDTAGQER+R ITS+YYRG+ G ++VYDVT +F V+ WL+E+ + S ++ +LVGNK DL+ R V + A+ FA+ K F+ETSAL+S NVE+AF Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAF 162
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.493e-42 Identity = 88/159 (55.35%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK+DL R VST+ A+ FAE F+ETSA + NVE AF Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAF 162
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42 Identity = 86/159 (54.09%), Postives = 115/159 (72.33%), Query Frame = 1 Query: 244 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 +YDYLFK++LIGDSGVGKS LL RF+ + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK+DL RA+ E A++FA++ FMETSA ++ NVE AF Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAF 162
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 81/158 (51.27%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 YDYLFK++LIGDSGVGK+ LL RF+++ F+ STIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS E + A F+ETSA S NVE AF Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAF 162
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 81/158 (51.27%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 YDYLFK++LIGDSGVGK+ LL RF+++ F+ STIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS E + A F+ETSA S NVE AF Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAF 162
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 81/158 (51.27%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 YDYLFK++LIGDSGVGK+ LL RF+++ F+ STIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS E + A F+ETSA S NVE AF Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAF 162
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 81/158 (51.27%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 YDYLFK++LIGDSGVGK+ LL RF+++ F+ STIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS E + A F+ETSA S NVE AF Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAF 162
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.343e-42 Identity = 87/164 (53.05%), Postives = 112/164 (68.29%), Query Frame = 1 Query: 232 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL-RHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 RA DYDYL K++LIGDSGVGKS LL RF+ F+ +TIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W++ + H N+ +LVGNKAD+ RAV T Q+ A++ F ETSA +LNVE F Sbjct: 7 RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVF 170
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.343e-42 Identity = 87/164 (53.05%), Postives = 112/164 (68.29%), Query Frame = 1 Query: 232 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL-RHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 RA DYDYL K++LIGDSGVGKS LL RF+ F+ +TIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W++ + H N+ +LVGNKAD+ RAV T Q+ A++ F ETSA +LNVE F Sbjct: 7 RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVF 170
BLAST of FC873106 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42 Identity = 80/158 (50.63%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 247 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQSFAEKEKTFFMETSALESLNVENAF 720 YDYLFK++LIGDSGVGK+ LL RF+++ F+ STIG++F R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS E + A F+E SA S+NVE AF Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAF 162 The following BLAST results are available for this feature:
BLAST of FC873106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873106 ID=FC873106; Name=FC873106; organism=Citrus clementina; type=EST; length=722bpback to top |