FC873108

Overview
NameFC873108
Unique NameFC873108
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length823
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_BURXL (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Burkholderia xenovorans (strain LB400) GN=ubiE PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.770e-51
Identity = 117/248 (47.18%), Postives = 147/248 (59.27%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGF+ V  ++K+Q V+ VF SVA NYDLMNDLMSGGLHR WK   +++ N  PG K LD+AGGTGD                L         E   ++  DIN +ML VG+ R L++G    +LL    DAE + F D+  D  T+AFG+RN+TH + ALAE  RVLK  GR L LE S V  P+ K++YD YSF V+P +GE  A D GSYQYL ES+R  P QE    M+  AG   V+Y NL  G
Sbjct:    6 FGFQSVDEQDKAQKVAGVFHSVAANYDLMNDLMSGGLHRAWKMFTIAQANVRPGYKVLDIAGGTGD----------------LSKAFAKQAGETGEVWHTDINESMLRVGRDRLLDKGVITPALLC---DAEKIPFPDNYFDVVTVAFGLRNMTHKDIALAEMRRVLKPAGRLLVLEFSKVWDPL-KKVYDVYSFKVLPWLGEHFAKDAGSYQYLAESIRMHPDQETLKTMMEQAGLDGVKYYNLSAG 233          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_ENTS8 (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ubiE PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.924e-51
Identity = 115/251 (45.82%), Postives = 153/251 (60.96%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKEL---YDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGF+ V  E+K+ +V+ VF SVA  YD+MNDLMS G+HRLWK   +       G K LD+AGGTGD+  +    V                 E  ++ + DIN +ML +G+++    G    ++ +V+ +AEAL F D+T D  TI+FG+RNVT  EKAL   +RVLK GGR L LE S    PVF+ L   YD YSF ++P +GELVA D GSY+YL ES+R  P QE   AM++DAGF+ V Y N+ GG
Sbjct:   11 FGFQTVAKEQKADMVAQVFHSVAAKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQKVLDLAGGTGDLTAKFSRLVG----------------ESGKVVLADINDSMLKMGREKLRNIGIVG-NVEYVQANAEALPFPDNTFDCITISFGLRNVTDKEKALRSMFRVLKPGGRLLVLEFSK---PVFEPLNKAYDAYSFHILPRVGELVAKDAGSYRYLAESIRMHPDQETLKAMMNDAGFENVNYYNMTGG 241          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_THICR (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Thiomicrospira crunogena (strain XCL-2) GN=ubiE PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.431e-51
Identity = 110/248 (44.35%), Postives = 148/248 (59.68%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGF EVP EEK + V  VF SVA NYD+MND+MS G+HRLWK   +      PG   LD+AGGTGD+       V                 +  R+ + DIN +M+ VG+ R    G    ++ +   +AEAL + D+T D  TI+FG+RNVT+ +KAL E YRVLK GG+ + LE S V  P+  + YD+YSF+++P +G+L+A D  SYQYL ES+R  P QE    M+ +AGF K EY N+  G
Sbjct:   14 FGFSEVPLEEKVKKVKGVFDSVAGNYDIMNDVMSFGIHRLWKRHAIELSGIRPGNVVLDLAGGTGDLTKAFAKRVG----------------KTGRVVLADINESMVRVGRDRLTNEGIIG-NVDYTITNAEALTYPDNTFDLVTISFGLRNVTNKDKALEEIYRVLKPGGQLMVLEFSKVTQPLLAKAYDFYSFNILPKMGKLIADDEASYQYLAESIRMHPDQETLKKMMLEAGFDKAEYLNMSEG 244          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_LARHH (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Laribacter hongkongensis (strain HLHK9) GN=ubiE PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.431e-51
Identity = 117/248 (47.18%), Postives = 152/248 (61.29%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGFK V  ++K+  V+ VF SVAK YD+MNDLMSGGLHR+WK   +S     PGMK LD+AGGTGD+A          K+R         + +   +++ DIN +ML VG+ R L+ G     L     DAE L F DS  D  ++AFG+RN+TH ++AL E  RVLK GG+ L LE S V  P+ K +YD YSF  +P +G+LVA D  SYQYL ES+R  P Q+    M+ +AGF KV+Y NL  G
Sbjct:    7 FGFKTVNEDDKAGRVAEVFHSVAKKYDVMNDLMSGGLHRIWKHFTLSTAGVRPGMKVLDIAGGTGDLA-------RGWKKR---------VGKTGEVWLTDINSSMLTVGRDRLLDEG---MILPVAIADAEKLPFPDSHFDLVSVAFGLRNMTHKDQALKEMCRVLKPGGKLLVLEFSKVWTPL-KPVYDLYSFKALPLMGKLVARDADSYQYLAESIRMHPDQDTLKDMMLEAGFGKVDYHNLSAG 234          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: COQ5_YEAST (Ubiquinone biosynthesis methyltransferase COQ5, mitochondrial OS=Saccharomyces cerevisiae GN=COQ5 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.431e-51
Identity = 117/257 (45.53%), Postives = 158/257 (61.48%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKL------NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG--YQDKSLLWVEGDAEALCFEDS-TMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FG K V    K +LV +VFSSVA  YDLMND+MS G+HRLWKD  ++KL      N    +  +DVAGG+GD+AF +LD   S       D        E+ + + DINP+ML  G+KRA+E+G  ++D  + ++  + E L   DS + D YT++FGIRN T I+K L  AYRVLK GG F CLE S ++ P+    Y  ++  V+P +G ++A D  SYQYLVES+ RFP QE F +MI  AGF+   YE+L  G
Sbjct:   53 FGSKTVLKSTKQKLVGDVFSSVANRYDLMNDVMSLGIHRLWKDHFINKLDAGKRPNSTTPLNFIDVAGGSGDIAFGLLDHAES----KFGDT-------ESTMDIVDINPDMLKEGEKRAMEQGKYFKDPRVRFLVSNGEKLEEIDSDSKDIYTVSFGIRNFTDIQKGLNTAYRVLKPGGIFYCLEFSKIENPLMDFAYQQWA-KVLPVMGSMIANDYDSYQYLVESIERFPDQETFKSMIEKAGFKSAGYESLTFG 297          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_SHELP (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ubiE PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.097e-50
Identity = 106/248 (42.74%), Postives = 152/248 (61.29%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FG+K V AE+K+ LV++VF SVA  YD+MND+MS G+HRLWK   +      PGMK LD+AGGTGD+  +    V +  +                + + DIN +ML VG+++   RG    ++ +V+ +AEAL F D+  D  TIAFG+RNVT  + A+    RVLK GG+ L LE S     + +++YD YSF ++P +G+++  D GSY+YL ES+R  P QE    M+ DAGF++VEY N+  G
Sbjct:   11 FGYKTVDAEKKADLVADVFHSVAAKYDIMNDVMSFGIHRLWKRFTIESAGARPGMKVLDLAGGTGDLTAKFSHIVGNTGQ----------------VTLADINDSMLKVGREKLRNRGVVG-NVNYVQANAEALPFPDNHFDIITIAFGLRNVTDKDAAIRSMLRVLKPGGKLLILEFSKPQHDLMRKVYDLYSFKILPKMGDIITQDAGSYEYLAESIRMHPDQETLKGMMVDAGFEQVEYTNMTDG 241          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_PECCP (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ubiE PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.169e-50
Identity = 112/248 (45.16%), Postives = 143/248 (57.66%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGF+ V  +EK  +V+ VF SVA  YDLMNDLMS G+HR+WK   +         + LD+AGGTGD+  +    V                 E   + + DIN +ML VG+++   +G  D ++ +V+ +AEAL F D   D  TI+FG+RNVT   KAL   YRVLK GGR L LE S   I     +YD YSF ++P IGE VA D GSY+YL ES+R  P QE    M+SDAGF  V Y NL GG
Sbjct:   11 FGFRTVARDEKEVMVAEVFHSVAAKYDLMNDLMSFGIHRIWKRFTIECSGVRRNQRVLDLAGGTGDLTAKFSRMVG----------------EGGEVILADINASMLKVGREKLRNKGIID-NISYVQANAEALPFPDDFFDCITISFGLRNVTDKNKALRSMYRVLKPGGRLLVLEFSKPIIKQLSTVYDAYSFHILPRIGEAVASDAGSYRYLAESIRMHPDQETLKGMMSDAGFDSVNYFNLTGG 241          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_ERWCT (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Erwinia carotovora subsp. atroseptica GN=ubiE PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.169e-50
Identity = 112/248 (45.16%), Postives = 143/248 (57.66%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGF+ V  +EK  +V+ VF SVA  YDLMNDLMS G+HR+WK   +         + LD+AGGTGD+  +    V                 E   + + DIN +ML VG+++   +G  D ++ +V+ +AEAL F D   D  TI+FG+RNVT   KAL   YRVLK GGR L LE S   I     +YD YSF ++P IGE VA D GSY+YL ES+R  P QE    M+SDAGF  V Y NL GG
Sbjct:   11 FGFRTVAKDEKEVMVAEVFHSVAAKYDLMNDLMSFGIHRIWKRFTIECSGVRRNQRVLDLAGGTGDLTAKFSRMVG----------------EGGEVILADINASMLKVGREKLRNKGIID-NINYVQANAEALPFPDDFFDCITISFGLRNVTDKNKALRSMYRVLKPGGRLLVLEFSKPVIKQLSTIYDAYSFHILPRIGEAVASDAGSYRYLAESIRMHPDQETLKGMMSDAGFDSVNYFNLTGG 241          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_BURPP (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ubiE PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.169e-50
Identity = 115/248 (46.37%), Postives = 146/248 (58.87%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGF+ V  ++K+Q V+ VF SVA NYDLMNDLMSGGLHR WK   +++ N  PG K LD+AGGTGD                L         +   ++  DIN +ML VG+ R L++G    +LL    DAE + F D+  D  T+AFG+RN+TH + ALAE  RVLK  GR L LE S V  P+ K++YD YSF V+P +GE  A D  SYQYL ES+R  P QE    M+  AG   V+Y NL  G
Sbjct:    6 FGFQSVDEQDKAQKVAGVFHSVAANYDLMNDLMSGGLHRAWKMFTIAQANVRPGYKVLDIAGGTGD----------------LSKAFAKQAGDTGEVWHTDINESMLRVGRDRLLDKGVITPALLC---DAEKIPFPDNYFDVVTVAFGLRNMTHKDVALAEMRRVLKPAGRLLVLEFSKVWDPL-KKVYDVYSFKVLPWLGERFAKDAESYQYLAESIRMHPDQETLKTMMEQAGLDGVKYYNLSAG 233          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_SHEPA (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ubiE PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.444e-50
Identity = 104/248 (41.94%), Postives = 151/248 (60.89%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FG+K V AE+K+ +V+ VF SVA  YD+MND+MS G+HR+WK   +      PGMK LD+AGGTGD+  +    V                 E  ++ + DIN +ML VG+++  ++G    ++ +V+ +AEAL F D+  D  TIAFG+RNVT+ + A+A   RVLK GG+ L LE S     + +++YD YSF V+P +G L+  D  SY+YL ES+R  P Q+    M+ DAGF++V Y N+  G
Sbjct:   11 FGYKTVEAEKKADMVAGVFHSVAAKYDIMNDVMSFGIHRMWKRFTIESAGARPGMKVLDLAGGTGDLTAKFSRIVG----------------ETGQVTLADINDSMLKVGREKLRDKGIVG-NVNYVQANAEALPFPDNHFDIITIAFGLRNVTNKDAAIASMLRVLKPGGKLLVLEFSKPQHEIMRKIYDIYSFKVLPKMGSLITKDADSYEYLAESIRMHPDQDTLKQMMEDAGFEQVNYTNMTDG 241          
The following BLAST results are available for this feature:
BLAST of FC873108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 408
Match NameE-valueIdentityDescription
UBIE_BURXL3.770e-5147.18Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_ENTS84.924e-5145.82Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_THICR6.431e-5144.35Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_LARHH6.431e-5147.18Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
COQ5_YEAST6.431e-5145.53Ubiquinone biosynthesis methyltransferase COQ5, mi... [more]
UBIE_SHELP1.097e-5042.74Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_PECCP4.169e-5045.16Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_ERWCT4.169e-5045.16Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_BURPP4.169e-5046.37Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_SHEPA5.444e-5041.94Ubiquinone/menaquinone biosynthesis methyltransfer... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CG08FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CG08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873108 ID=FC873108; Name=FC873108; organism=Citrus clementina; type=EST; length=823bp
AGACTCTTACCGATGCTCTCTTCCACTTCTTTACTGCATTCACATGCTAC
AAGCTTCGGGTTCAAAGAAGTACCGGCAGAAGAAAAAAGTCAATTGGTTA
GCAATGTTTTCAGCAGTGTTGCTAAAAACTATGATCTCATGAATGATTTG
ATGAGTGGTGGATTGCATAGATTGTGGAAGGATAGACTTGTTTCCAAGTT
GAATCCATTTCCGGGAATGAAGCACCTTGATGTTGCTGGTGGAACAGGGG
ATGTTGCTTTCAGGATTTTAGACACTGTAAATAGCATCAAACGAAGAGCA
CTCCAGGATGTTCTTGAAGATGATTTACAGGAGGAAACTCGGATATATGT
TTGTGACATCAACCCAAACATGCTAAATGTTGGTAAAAAGCGTGCTTTAG
AGAGAGGTTACCAGGACAAATCACTTTTGTGGGTGGAAGGAGATGCAGAA
GCCTTGTGCTTTGAAGACAGTACTATGGATGGTTACACAATTGCCTTCGG
AATTAGGAATGTTACTCATATTGAGAAGGCTCTAGCTGAAGCTTACAGGG
TACTGAAACGTGGAGGAAGATTTCTGTGCCTTGAGCTGAGCCACGTCGAT
ATTCCTGTATTCAAGGAATTGTACGATTATTACTCATTTTCAGTCATTCC
AGCAATAGGGGAACTGGTAGCAGGTGATCGGGGTTCTTATCAGTACTTGG
TTGAGAGTGTCCGCCGTTTTCCCCCTCAGGAAAAATTCGCTGCAATGATT
TCTGATGCTGGATTTCAGAAGGTTGAGTATGAAAATCTTGTTGGCGGGAG
TCGTCGCCTTACATTCAGGGATT
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