FC873108

Overview
NameFC873108
Unique NameFC873108
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length823
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_YERPB (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ubiE PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.110e-50
Identity = 110/248 (44.35%), Postives = 148/248 (59.68%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGF+ V  E+K  +V+ VF SVA  YDLMNDLMS G+HR+WK   V       G + LD+AGGTGD+  +    V                 E+  + + DIN +ML +G+++  ++G    ++ +V+ +AEAL F D+  D  TI+FG+RNVT  EKAL   +RVLK GGR L LE S   +    + YD YSF ++P IGELVA D  SY+YL ES+R  P QE    M++DAGF+ V Y NL GG
Sbjct:   11 FGFRTVAKEQKEGMVAEVFHSVAAKYDLMNDLMSFGVHRIWKRFTVDCSGVRRGQRVLDLAGGTGDLTAKFSRLVG----------------EQGEVILADINESMLRMGREKLRDKGIVG-NVSYVQANAEALPFPDNYFDCITISFGLRNVTEKEKALRSMFRVLKPGGRLLVLEFSKPLLEPLSKAYDAYSFHILPKIGELVAQDAESYRYLAESIRMHPDQETLKGMMADAGFENVTYSNLTGG 241          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_YERPA (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ubiE PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.110e-50
Identity = 110/248 (44.35%), Postives = 148/248 (59.68%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGF+ V  E+K  +V+ VF SVA  YDLMNDLMS G+HR+WK   V       G + LD+AGGTGD+  +    V                 E+  + + DIN +ML +G+++  ++G    ++ +V+ +AEAL F D+  D  TI+FG+RNVT  EKAL   +RVLK GGR L LE S   +    + YD YSF ++P IGELVA D  SY+YL ES+R  P QE    M++DAGF+ V Y NL GG
Sbjct:   11 FGFRTVAKEQKEGMVAEVFHSVAAKYDLMNDLMSFGVHRIWKRFTVDCSGVRRGQRVLDLAGGTGDLTAKFSRLVG----------------EQGEVILADINESMLRMGREKLRDKGIVG-NVSYVQANAEALPFPDNFFDCITISFGLRNVTEKEKALRSMFRVLKPGGRLLVLEFSKPLLEPLSKAYDAYSFHILPKIGELVAQDAESYRYLAESIRMHPDQETLKGMMADAGFENVTYSNLTGG 241          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_YERP3 (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ubiE PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.110e-50
Identity = 110/248 (44.35%), Postives = 148/248 (59.68%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGF+ V  E+K  +V+ VF SVA  YDLMNDLMS G+HR+WK   V       G + LD+AGGTGD+  +    V                 E+  + + DIN +ML +G+++  ++G    ++ +V+ +AEAL F D+  D  TI+FG+RNVT  EKAL   +RVLK GGR L LE S   +    + YD YSF ++P IGELVA D  SY+YL ES+R  P QE    M++DAGF+ V Y NL GG
Sbjct:   11 FGFRTVAKEQKEGMVAEVFHSVAAKYDLMNDLMSFGVHRIWKRFTVDCSGVRRGQRVLDLAGGTGDLTAKFSRLVG----------------EQGEVILADINESMLRMGREKLRDKGIVG-NVSYVQANAEALPFPDNYFDCITISFGLRNVTEKEKALRSMFRVLKPGGRLLVLEFSKPLLEPLSKAYDAYSFHILPKIGELVAQDAESYRYLAESIRMHPDQETLKGMMADAGFENVTYSNLTGG 241          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_SHEPW (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=ubiE PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.110e-50
Identity = 105/248 (42.34%), Postives = 151/248 (60.89%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FG+K V AE+K+ +V+ VF SVA  YD+MND+MS G+HR+WK   +      PGMK LD+AGGTGD+  +    V                 E+ ++ + DIN +ML VG+++  ++G    ++ +V+ +AEAL F D+  D  TIAFG+RNVT  + A+A   RVLK GG+ L LE S     + +++YD YSF V+P +G L+  D  SY+YL ES+R  P QE    M+ DAGF++V Y N+  G
Sbjct:   11 FGYKTVEAEQKADMVAGVFHSVAAKYDIMNDVMSFGIHRMWKRFTIESAGARPGMKVLDLAGGTGDLTAKFSHIVG----------------EKGQVTLADINDSMLKVGREKLRDKGIVG-NVNYVQANAEALPFPDNHFDIITIAFGLRNVTDKDAAIASMLRVLKPGGKLLILEFSKPKHDIMRKVYDLYSFKVMPKMGALITQDADSYEYLAESIRMHPDQETLKQMMVDAGFEQVNYTNMTDG 241          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_LEGPL (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Legionella pneumophila (strain Lens) GN=ubiE PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.110e-50
Identity = 108/248 (43.55%), Postives = 146/248 (58.87%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGFK V   EK + V+ VF SVAKNYD MNDLMS G+H LWK   +   +  PG   LD+AGG+GD                L  +L   + +  ++ + DIN  ML+VG+ R L+ G   K++ +V+G+A+ L F D++    T+ FG+RNVT  ++AL   YRV K GG+ + LE S    P  K +YD+YSF+++P IG+ VA D  SYQYL ES+R  P QE   AMI   GF+   Y NL GG
Sbjct:   10 FGFKSVDWNEKEKKVAEVFHSVAKNYDRMNDLMSLGIHHLWKRYTIELSHVRPGQSVLDLAGGSGD----------------LTRLLSQKVGDSGQVILADINAAMLHVGRDRLLDEGLF-KNIRYVQGNAQCLPFADNSFHCITMGFGLRNVTDKDEALQSMYRVCKPGGKLMVLEFSTPVFPGLKPVYDWYSFNILPKIGKFVANDEASYQYLAESIRMHPDQETLKAMIERVGFEDCHYHNLSGG 240          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_LEGPA (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Legionella pneumophila (strain Paris) GN=ubiE PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.110e-50
Identity = 108/248 (43.55%), Postives = 146/248 (58.87%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGFK V   EK + V+ VF SVAKNYD MNDLMS G+H LWK   +   +  PG   LD+AGG+GD                L  +L   + +  ++ + DIN  ML+VG+ R L+ G   K++ +V+G+A+ L F D++    T+ FG+RNVT  ++AL   YRV K GG+ + LE S    P  K +YD+YSF+++P IG+ VA D  SYQYL ES+R  P QE   AMI   GF+   Y NL GG
Sbjct:   10 FGFKSVDWNEKEKKVAEVFHSVAKNYDRMNDLMSLGIHHLWKRYTIELSHVRPGQSVLDLAGGSGD----------------LTRLLSQKVGDSGQVVLADINAAMLHVGRDRLLDEGLF-KNIRYVQGNAQCLPFADNSFHCITMGFGLRNVTDKDEALQSMYRVCKPGGKLMVLEFSTPVFPGLKPVYDWYSFNILPKIGKFVANDEASYQYLAESIRMHPDQETLKAMIERVGFEDCHYHNLSGG 240          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_KLEP3 (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Klebsiella pneumoniae (strain 342) GN=ubiE PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.110e-50
Identity = 111/248 (44.76%), Postives = 146/248 (58.87%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FGF+ V  E+K  +V++VF SVA  YD+MNDLMS G+HRLWK   +       G   LD+AGGTGD+  +    V                 E  R+ + DIN +ML +G+++    G    ++ +V+ +AEAL F D+T D  TI+FG+RNVT  EKAL   YRVLK GGR L LE S   I    + YD YSF ++P +GELVA D  SY+YL ES+R  P QE    M+ DAGF+ V+Y NL  G
Sbjct:   11 FGFQTVAKEQKQDMVAHVFHSVAAKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVG----------------ETGRVMLADINDSMLKMGREKLRNIGIVG-NVEYVQANAEALPFADNTFDCITISFGLRNVTDKEKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHILPKVGELVAKDGDSYRYLAESIRMHPDQETLKGMMQDAGFESVDYHNLTAG 241          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_SHESW (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Shewanella sp. (strain W3-18-1) GN=ubiE PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.287e-50
Identity = 104/248 (41.94%), Postives = 151/248 (60.89%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FG+K V A++K++LV+ VF SVA  YD+MND+MS G+HR WK   +      PGMK LD+AGGTGD+  +    V                 ++  + + DIN +ML VG+ +  ++G  + ++ +V+ +AEAL F D+  D  TIAFG+RNVT  + AL    RVLK GG+ L LE S     + +++YD YSF V+P +GEL+  D  SY+YL ES+R  P Q+    M+ DAGF++V+Y N+  G
Sbjct:   11 FGYKTVEADKKAELVAGVFHSVAAKYDIMNDVMSFGIHRFWKRHTIEVSGARPGMKVLDLAGGTGDLTAKFSHLVG----------------DKGEVVLADINDSMLKVGRTKLRDKGIVN-NVSYVQANAEALPFPDNHFDIITIAFGLRNVTDKDAALRSMNRVLKPGGKLLVLEFSKPQHEIMRKVYDLYSFKVLPKMGELITKDADSYEYLAESIRMHPDQDTLKQMMVDAGFEQVDYTNMTDG 241          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_SHESH (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Shewanella sediminis (strain HAW-EB3) GN=ubiE PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.287e-50
Identity = 103/248 (41.53%), Postives = 151/248 (60.89%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FG+K V AE+K+ +V+ VF SVA  YD+MND+MS G+HR+WK   +      PGMK LD+AGGTGD+  +    V                 ++ ++ + DIN +ML VG+++  ++G    ++ +V+ +AEAL F D+  D  TIAFG+RNVT  + A+    RVLK GG+ L LE S     V +++YD YSF ++P +G L+  D  SY+YL ES+R  P Q+    M+ DAGF++VEY N+  G
Sbjct:   11 FGYKTVEAEQKADMVAGVFHSVAAKYDIMNDVMSFGIHRMWKRFTIESAGARPGMKVLDLAGGTGDLTAKFSHLVG----------------DKGQVTLADINDSMLKVGREKLRDKGIVG-NVNYVQANAEALPFPDNHFDIITIAFGLRNVTDKDSAIRSMLRVLKPGGKLLILEFSKPQHDVMRKIYDLYSFKILPKMGSLITQDAESYEYLAESIRMHPDQDTLKGMMVDAGFEQVEYTNMTDG 241          
BLAST of FC873108 vs. ExPASy Swiss-Prot
Match: UBIE_SHEPC (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=ubiE PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.287e-50
Identity = 104/248 (41.94%), Postives = 151/248 (60.89%), Query Frame = 1
Query:   55 FGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYQDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 798
            FG+K V A++K++LV+ VF SVA  YD+MND+MS G+HR WK   +      PGMK LD+AGGTGD+  +    V                 ++  + + DIN +ML VG+ +  ++G  + ++ +V+ +AEAL F D+  D  TIAFG+RNVT  + AL    RVLK GG+ L LE S     + +++YD YSF V+P +GEL+  D  SY+YL ES+R  P Q+    M+ DAGF++V+Y N+  G
Sbjct:   11 FGYKTVEADKKAELVAGVFHSVAAKYDIMNDVMSFGIHRFWKRHTIEVSGARPGMKVLDLAGGTGDLTAKFSHLVG----------------DKGEVVLADINDSMLKVGRTKLRDKGIVN-NVSYVQANAEALPFPDNHFDIITIAFGLRNVTDKDAALRSMNRVLKPGGKLLVLEFSKPQHEIMRKVYDLYSFKVLPKMGELITKDADSYEYLAESIRMHPDQDTLKQMMVDAGFEQVDYTNMTDG 241          
The following BLAST results are available for this feature:
BLAST of FC873108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 408
Match NameE-valueIdentityDescription
UBIE_YERPB7.110e-5044.35Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_YERPA7.110e-5044.35Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_YERP37.110e-5044.35Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_SHEPW7.110e-5042.34Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_LEGPL7.110e-5043.55Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_LEGPA7.110e-5043.55Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_KLEP37.110e-5044.76Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_SHESW9.287e-5041.94Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_SHESH9.287e-5041.53Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
UBIE_SHEPC9.287e-5041.94Ubiquinone/menaquinone biosynthesis methyltransfer... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CG08FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CG08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873108 ID=FC873108; Name=FC873108; organism=Citrus clementina; type=EST; length=823bp
AGACTCTTACCGATGCTCTCTTCCACTTCTTTACTGCATTCACATGCTAC
AAGCTTCGGGTTCAAAGAAGTACCGGCAGAAGAAAAAAGTCAATTGGTTA
GCAATGTTTTCAGCAGTGTTGCTAAAAACTATGATCTCATGAATGATTTG
ATGAGTGGTGGATTGCATAGATTGTGGAAGGATAGACTTGTTTCCAAGTT
GAATCCATTTCCGGGAATGAAGCACCTTGATGTTGCTGGTGGAACAGGGG
ATGTTGCTTTCAGGATTTTAGACACTGTAAATAGCATCAAACGAAGAGCA
CTCCAGGATGTTCTTGAAGATGATTTACAGGAGGAAACTCGGATATATGT
TTGTGACATCAACCCAAACATGCTAAATGTTGGTAAAAAGCGTGCTTTAG
AGAGAGGTTACCAGGACAAATCACTTTTGTGGGTGGAAGGAGATGCAGAA
GCCTTGTGCTTTGAAGACAGTACTATGGATGGTTACACAATTGCCTTCGG
AATTAGGAATGTTACTCATATTGAGAAGGCTCTAGCTGAAGCTTACAGGG
TACTGAAACGTGGAGGAAGATTTCTGTGCCTTGAGCTGAGCCACGTCGAT
ATTCCTGTATTCAAGGAATTGTACGATTATTACTCATTTTCAGTCATTCC
AGCAATAGGGGAACTGGTAGCAGGTGATCGGGGTTCTTATCAGTACTTGG
TTGAGAGTGTCCGCCGTTTTCCCCCTCAGGAAAAATTCGCTGCAATGATT
TCTGATGCTGGATTTCAGAAGGTTGAGTATGAAAATCTTGTTGGCGGGAG
TCGTCGCCTTACATTCAGGGATT
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