FC873113

Overview
NameFC873113
Unique NameFC873113
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length595
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPWD1_BOVIN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Bos taurus GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 64/160 (40.00%), Postives = 84/160 (52.50%), Query Frame = 2
Query:   41 PKVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            PK   D  +     G I ++LF    P+T ENF   C   +         +Y G +FHR+I GFM Q            ESI+G +F DE +   +H  P  LSM NAG  TNGSQFF+    T WLD KH VFG+V +GM+VV+ I  V   + +T+KP
Sbjct:  485 PKRVSDSAIIHTSMGDIHIKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNV-KVNPKTDKP 632          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL1_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryptococcus neoformans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.859e-21
Identity = 63/153 (41.18%), Postives = 84/153 (54.90%), Query Frame = 2
Query:   35 PNPK-VFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 487
            P+P  V FD +VG     +  +EL+    P+T  NF  L   E+G        +Y G  FHR+IP FM Q             SIYG +FADE   + +  G GIL+M N+GP TNGSQFF+  A T +LDGKH +FG+V  GM  ++ +E V
Sbjct:    4 PSPTYVTFDTSVG-----SFTVELYTAHAPKTCNNFAKLA--ERG--------YYNGVIFHRIIPNFMIQGGDPTGTGRGGT-SIYGDRFADEIHPELRFVGAGILAMANSGPNTNGSQFFITCAPTPYLDGKHTIFGRVSSGMKTIQRLEAV 140          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPWD1_PONAB (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Pongo abelii GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.040e-21
Identity = 64/160 (40.00%), Postives = 83/160 (51.88%), Query Frame = 2
Query:   41 PKVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            PK   D  +     G I  +LF    P+T ENF   C   +         +Y G +FHR+I GFM Q            ESI+G +F DE +   +H  P  LSM NAG  TNGSQFF+    T WLD KH VFG+V +GM+VV+ I  V   + +T+KP
Sbjct:  487 PKRVSDSAIIHTSMGDIHTKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNV-KVNPKTDKP 634          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPWD1_HUMAN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.040e-21
Identity = 64/160 (40.00%), Postives = 83/160 (51.88%), Query Frame = 2
Query:   41 PKVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            PK   D  +     G I  +LF    P+T ENF   C   +         +Y G +FHR+I GFM Q            ESI+G +F DE +   +H  P  LSM NAG  TNGSQFF+    T WLD KH VFG+V +GM+VV+ I  V   + +T+KP
Sbjct:  487 PKRVSDSAIIHTSMGDIHTKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNV-KVNPKTDKP 634          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPWD1_MOUSE (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Mus musculus GN=Ppwd1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.123e-20
Identity = 64/160 (40.00%), Postives = 84/160 (52.50%), Query Frame = 2
Query:   41 PKVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            PK   D  +     G I ++LF    P+T ENF   C   +         +Y G +FHR+I GFM Q            ESI+G +F DE +   +H  P  LSM NAG  TNGSQFF+    T WLD KH VFG+V +GM+VV+ I  V   + +T+KP
Sbjct:  487 PKRVSDSAIVHTSMGDIHIKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVSKGMEVVQRIFNV-KVNPQTDKP 634          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.466e-20
Identity = 62/142 (43.66%), Postives = 79/142 (55.63%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXX-----ESIYGSKFADE-NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMD-VVKAIEKV 487
            G I +E+F +  P+TAENF ALC        SG   +Y  ++FHR IPGFM Q                  SI+G KF DE     KH   GI+SM N+GP TNGSQFF+  AK   LD K+ VFG+V++G D  +  +EKV
Sbjct:   10 GDIKIEVFCEAVPKTAENFLALCA-------SG---YYDNNTFHRNIPGFMIQVHEHLHTGDPTGTGKGGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKVIDGADSTLDMMEKV 141          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: CYP7_YEAST (Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccharomyces cerevisiae GN=CPR7 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.466e-20
Identity = 70/193 (36.27%), Postives = 90/193 (46.63%), Query Frame = 2
Query:   38 NPKVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGE-KGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXES---------IYGSK--------------FADENFVKKHTGPGILSMENAG-PGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVG-SSSGRTNKPGGIADCG 538
            +P V+ D+++  +P G I  +LF +  P+T ENF  LC G+ K   K  + L YKG+ FHRV+  FM Q             S         IY  K              F DEN + +   P  L M N G P TN SQFF+ T     L+GKH +FGQVV G  VV+ IE     S G       I+DCG
Sbjct:    4 DPLVYLDISIDKKPIGRIVCKLFREKAPKTTENFYKLCAGDVKSPLKDQQYLSYKGNGFHRVVKNFMIQAGDIVFGTQKDSSSSSVGKGGCSIYADKEEVKTDDESFCYGNFEDEN-LGEFVEPFTLGMANLGSPNTNNSQFFITTYAAPHLNGKHSIFGQVVHGKSVVRTIENCRVDSDGVPESDVRISDCG 195          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.915e-20
Identity = 57/136 (41.91%), Postives = 76/136 (55.88%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 487
            G I +ELF + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G KF DE +   KH+  G++SM N GP TNGSQFF+   K   LD K+ VFG+V++G++ +  +EK+
Sbjct:   10 GDIKIELFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPLGTGKGGT-SIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.915e-20
Identity = 59/146 (40.41%), Postives = 78/146 (53.42%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            G + +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG G+LSM N+GP TN SQFF+      +LD KH +FG+VV G D + A+E V  S  +T++P
Sbjct:  289 GDLNLELHCDLTPKTCENFIKLC----------KKQYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENV-ESDPKTDRP 422          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.501e-20
Identity = 60/146 (41.10%), Postives = 79/146 (54.11%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            G + +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG GILSM N+GP +N SQFF+      +LD KH +FG+VV G DV+ A+E V  S  +T++P
Sbjct:  289 GDLNLELHCDLTPKTCENFIRLC----------KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENV-ESDPKTDRP 422          
The following BLAST results are available for this feature:
BLAST of FC873113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
PPWD1_BOVIN2.955e-2140.00Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPIL1_CRYNE3.859e-2141.18Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryp... [more]
PPWD1_PONAB5.040e-2140.00Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_HUMAN5.040e-2140.00Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_MOUSE1.123e-2040.00Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPIL3_RHIOR1.466e-2043.66Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhiz... [more]
CYP7_YEAST1.466e-2036.27Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccha... [more]
PPIL3_CHICK1.915e-2041.91Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL2_MOUSE1.915e-2040.41Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL2_HUMAN2.501e-2041.10Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CH01FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CH01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873113 ID=FC873113; Name=FC873113; organism=Citrus clementina; type=EST; length=595bp
TTGTTTTTTTCTTTTAACCAACCCATCAAAAATGCCAAACCCCAAAGTGT
TCTTCGACATGACCGTCGGCGGTCAGCCCGCCGGCACGATCGGGATGGAG
CTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTG
CACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGG
GCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGAC
TTCACCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCAAAATT
CGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCA
TGGAGAATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACG
GCCAAGACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGT
CGAAGGAATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCG
GAAGGACCAACAAGCCCGGCGGGATCGCTGATTGCGGTCAATTGTCTTAG
ATTTGATCATGATAATGATCGCCATCATCACGAGCCGACTGATCG
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