FC873113

Overview
NameFC873113
Unique NameFC873113
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length595
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPI1_STAHJ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1997 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.881e-16
Identity = 62/173 (35.84%), Postives = 77/173 (44.51%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            G +  +LF D+ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  ++     G LSM NAGP TNGSQFFV   K                            T WLD KH VFGQ++EG   ++ I    +  G  +KP
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGSFEDEFSLEAFNLYGALSMANAGPNTNGSQFFVVQMKEVPESMVNQLVDGGWPEPIAKAYADNGGTPWLDQKHTVFGQLIEGEATLEDI--ANTKVGAQDKP 184          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16
Identity = 42/102 (41.18%), Postives = 51/102 (50.00%), Query Frame = 2
Query:   47 VFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSM 352
            V+ D+ +   P G +  EL+ D  PRT  NF+ LCTG  G  + G  LHYK S FHRV+     Q            ESIYG  F DENF   H   G+L M
Sbjct:  146 VYLDICIDLSPIGRLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPHNKRGVLGM 247          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPI1_STAS1 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1821 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.087e-15
Identity = 62/173 (35.84%), Postives = 76/173 (43.93%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVC----------------------------TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            G +  +L  DV P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE   +     G LSM NAGP TNGSQFF+                             T  T WLD KH VFGQ++EG D ++ I    +  G  +KP
Sbjct:   25 GDMTFKLLPDVAPKTVENFVTHA-------KNG---YYNGVTFHRVINDFMVQGGDPTATGMGG-ESIYGEPFEDEFSKEAFNIYGALSMANAGPHTNGSQFFIVQMNEVPESMLSQLADGGWPEPIVKAYAETGGTPWLDQKHTVFGQLIEGKDTLEDI--ANTKVGPQDKP 184          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL2_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibberella zeae GN=CYP8 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.132e-15
Identity = 55/147 (37.41%), Postives = 74/147 (50.34%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALC-TGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            G + +EL+ +  P+   NF  L  TG           +YKG +FHR IP FM Q            +S++G  F DE +    H G G LSM N G  TN SQFF     T  LD KH VFG+VVE ++V+  +E V +    +N+P
Sbjct:  332 GDLTIELYPEFAPKAVWNFIKLSQTG-----------YYKGVAFHRNIPNFMIQGGDPSGSGRGG-QSVWGKYFDDEFDGPMTHNGRGTLSMANKGKNTNSSQFFFAYKPTPHLDRKHTVFGKVVENINVLSKMENVPTDG--SNRP 464          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIA_MYCLE (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium leprae GN=ppiA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.397e-15
Identity = 54/145 (37.24%), Postives = 75/145 (51.72%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGK---SGKPL--HYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS 499
            G I + LF +  P+T  NF  L  G K       SG P    Y G+ FHRVI GFM Q                G KFADE   + +   P +L+M NAGPGTNGSQFF+   +T  L+ +H +FG+V +  D  K ++ + +++
Sbjct:   24 GDIKVALFGNHVPKTVANFVGLAQGTKEYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGETPHLNRRHTIFGEVTD-PDSQKVVDAISTTA 163          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14
Identity = 58/150 (38.67%), Postives = 73/150 (48.67%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE---NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMD--VVKAIEKVGSSSGRTNKP 517
            G + +EL     P+T  NF  LC       K GK   Y  + FHR IPGFM Q             SI+ S F DE       KH   G+LSM N G  TN SQFF+       LDGKH VFG++V+G     +  +E+V S  G T++P
Sbjct:  302 GALNLELHCGKAPKTCFNFLQLC-------KHGK---YDDTLFHRNIPGFMIQGGDPTGTGRGG-SSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDGDKDATLTKMEQVPSEQG-TDRP 439          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPI1_STAAW (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MW2) GN=MW0836 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14
Identity = 58/173 (33.53%), Postives = 76/173 (43.93%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSM N+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKP 184          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPI1_STAAS (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0824 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14
Identity = 58/173 (33.53%), Postives = 76/173 (43.93%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSM N+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKP 184          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPI1_STAAR (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0916 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14
Identity = 58/173 (33.53%), Postives = 76/173 (43.93%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSM N+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKP 184          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPI1_STAAN (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain N315) GN=SA0815 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14
Identity = 58/173 (33.53%), Postives = 76/173 (43.93%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSM N+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKP 184          
The following BLAST results are available for this feature:
BLAST of FC873113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
PPI1_STAHJ4.881e-1635.84Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL6_MOUSE8.326e-1641.18Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus ... [more]
PPI1_STAS11.087e-1535.84Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL2_GIBZE4.132e-1537.41Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibb... [more]
PPIA_MYCLE5.397e-1537.24Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIL2_USTMA1.202e-1438.67Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
PPI1_STAAW1.202e-1433.53Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAS1.202e-1433.53Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAR1.202e-1433.53Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAN1.202e-1433.53Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CH01FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CH01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873113 ID=FC873113; Name=FC873113; organism=Citrus clementina; type=EST; length=595bp
TTGTTTTTTTCTTTTAACCAACCCATCAAAAATGCCAAACCCCAAAGTGT
TCTTCGACATGACCGTCGGCGGTCAGCCCGCCGGCACGATCGGGATGGAG
CTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTG
CACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGG
GCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGAC
TTCACCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCAAAATT
CGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCA
TGGAGAATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACG
GCCAAGACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGT
CGAAGGAATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCG
GAAGGACCAACAAGCCCGGCGGGATCGCTGATTGCGGTCAATTGTCTTAG
ATTTGATCATGATAATGATCGCCATCATCACGAGCCGACTGATCG
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