FC873113

Overview
NameFC873113
Unique NameFC873113
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length595
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 2
Query:   80 AGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 448
            AG I +EL++  TP+   NF  LC             +Y G+ FHR++P F+ Q            ESIYG  F DE   + +    G+++M NAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKETPKACRNFVQLCMEG----------YYDGTIFHRMVPEFIVQGGDPTGTGTGG-ESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 44/124 (35.48%), Postives = 63/124 (50.81%), Query Frame = 2
Query:   80 AGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 448
            AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++M NAG   NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: SDC10_MACFA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Macaca fascicularis GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 44/124 (35.48%), Postives = 63/124 (50.81%), Query Frame = 2
Query:   80 AGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 448
            AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++M NAG   NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 44/124 (35.48%), Postives = 63/124 (50.81%), Query Frame = 2
Query:   80 AGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 448
            AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++M NAG   NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.125e-12
Identity = 59/172 (34.30%), Postives = 74/172 (43.02%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCT------AKTE-----W----------------LDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 517
            G + + LF D  P+T  NF        G+ K G   +Y G  FHR+IP FM Q            +SIYG  F DE   + +   G LSM NAGP TNGSQFF+        AK E     W                LD +H VFGQ+V+           G  +G  +KP
Sbjct:  297 GDMTLVLFPDHAPKTVANFL-------GLAKEG---YYDGIIFHRIIPEFMIQGGDPTGTGMGG-QSIYGESFEDEFSDELYNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQLVDETSFQVLDLIAGVETGAQDKP 457          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL2_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa GN=cyp-8 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.507e-12
Identity = 49/139 (35.25%), Postives = 66/139 (47.48%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMD-VVKAIEKVGS 493
            G + +EL  +  P+   NF  L   EKG        +Y+  +FHR I  FM Q             SI+G  F DE      H+  GI+SM N G  TN SQFF+       LD KH +F +V+EG D  + A+E V +
Sbjct:  339 GPLTLELLPEFAPKAVWNFLRL--SEKG--------YYRDVAFHRSIRNFMIQGGDPSGTGRGG-SSIWGKNFEDEFEGPNTHSARGIVSMANKGKNTNSSQFFITYRPASHLDRKHTIFAKVIEGQDTTLTAMENVAT 466          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: SDC10_XENLA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xenopus laevis GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.294e-12
Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 2
Query:   80 AGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 448
            AG I +EL++   P+   NF  LC             +Y  + FHRV+P F+ Q            ES++G  F DE   + +    G+++M NAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGEIDIELWSKEAPKACRNFVQLCLEG----------YYDNTIFHRVVPEFIIQGGDPTGTGTGG-ESVFGKPFRDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11
Identity = 47/126 (37.30%), Postives = 60/126 (47.62%), Query Frame = 2
Query:   80 AGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 454
            +G I +EL  +  P+   NF  L   +KG        +YK  +FHR I GFM Q            ESI+G  F DE     KH   G LSM N G  TN SQFF+       L+ KH +FG V++
Sbjct:  308 SGDINLELQTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPSGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVID 422          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11
Identity = 46/125 (36.80%), Postives = 59/125 (47.20%), Query Frame = 2
Query:   83 GTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 454
            G + +EL  +  P+   NF  L   +KG        +YK  +FHR I GFM Q            ESI+G  F DE     KH   G LSM N G  TN SQFF+       L+ KH +FG V++
Sbjct:  322 GDVNLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVID 435          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIL2_EMENI (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emericella nidulans GN=cyp8 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.620e-11
Identity = 47/126 (37.30%), Postives = 60/126 (47.62%), Query Frame = 2
Query:   80 AGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 454
            +G I +EL  +  P+   NF  L   +KG        +YK  +FHR I GFM Q            ESI+G  F DE     KH   G LSM N G  TN SQFF+       L+ KH +FG V++
Sbjct:  319 SGDINLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNLKHTIFGHVID 433          
The following BLAST results are available for this feature:
BLAST of FC873113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
SDC10_DANRE2.961e-1336.29Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Da... [more]
SDC10_PONAB8.616e-1335.48Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Po... [more]
SDC10_MACFA8.616e-1335.48Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ma... [more]
SDC10_HUMAN8.616e-1335.48Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]
BPPI_STRP61.125e-1234.30Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
PPIL2_NEUCR2.507e-1235.25Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neur... [more]
SDC10_XENLA7.294e-1233.87Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xe... [more]
PPIL2_ASPOR2.122e-1137.30Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_ASPFU2.122e-1136.80Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_EMENI3.620e-1137.30Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emer... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CH01FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CH01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873113 ID=FC873113; Name=FC873113; organism=Citrus clementina; type=EST; length=595bp
TTGTTTTTTTCTTTTAACCAACCCATCAAAAATGCCAAACCCCAAAGTGT
TCTTCGACATGACCGTCGGCGGTCAGCCCGCCGGCACGATCGGGATGGAG
CTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTG
CACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGG
GCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGAC
TTCACCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCAAAATT
CGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCA
TGGAGAATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACG
GCCAAGACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGT
CGAAGGAATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCG
GAAGGACCAACAAGCCCGGCGGGATCGCTGATTGCGGTCAATTGTCTTAG
ATTTGATCATGATAATGATCGCCATCATCACGAGCCGACTGATCG
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