FC873113

Overview
NameFC873113
Unique NameFC873113
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length595
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.722e-57
Identity = 108/171 (63.16%), Postives = 122/171 (71.35%), Query Frame = 2
Query:   32 MPNPKVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPGGIADCGQL 544
            M  P+VFFD+   G+  G I MEL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIPGFMCQ            +SIYG KFADENF  KHT PGILSM NAG  TNGSQFF+CTA T WLDGKHVVFG V +G+D++K +E  GS SG+T+K   IADCGQL
Sbjct:    1 MAKPQVFFDLQANGENLGRIVMELRADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVTQGLDIIKKVESYGSDSGKTSKKITIADCGQL 164          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.075e-55
Identity = 103/167 (61.68%), Postives = 124/167 (74.25%), Query Frame = 2
Query:   44 KVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPGGIADCGQL 544
            KVFFD+T+G   AG I MELF +VTP+TAENFRALCTGEKG+GK+GKPLH+KGS FHRVI  FM Q            ESIYG KFADENF  KH  PG+LSM NAGP TNGSQFF+      WLDGKHVVFG+VVEG+++++ +E  GS SG+T +   I+DCG++
Sbjct:    4 KVFFDITIGSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVEGLEILEQLEANGSQSGQTKQAIVISDCGEI 170          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: CYP5_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizopus oryzae GN=cyp5 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.395e-55
Identity = 101/168 (60.12%), Postives = 119/168 (70.83%), Query Frame = 2
Query:   41 PKVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPGGIADCGQL 544
            PKVFFD+ V G+P+G +  +LF+D  P+TAENFRALCTGEKG G SGKPLHYKGS FHR+IPGFM Q            ESIYG KF DENF  KHTG G+LSM NAGP TNGSQFF+   KT WLDG H VFGQ+VEG  V++ +E+ G+ SG       I DCG++
Sbjct:    7 PKVFFDVAVNGKPSGRLTFKLFSDTVPKTAENFRALCTGEKGTGVSGKPLHYKGSHFHRIIPGFMAQGGDFTMGNGRGGESIYGHKFNDENFTLKHTGKGVLSMANAGPNTNGSQFFITFDKTPWLDGNHTVFGQLVEGNQVLEILEQHGTQSGMPTAKVEIVDCGEI 174          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.552e-54
Identity = 112/168 (66.67%), Postives = 125/168 (74.40%), Query Frame = 2
Query:   50 FFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPGG---IADCGQL 544
            FFDMT+GGQPAG I MELF DV P+TAENFRALCTGEKGIG SGK + Y+GS FHRVIP FM Q            ESIYG+KFADENF+ KHT PG+LSM NAGPGTNGSQFF+ T  T  LDGKHVVFG+VVEGMDVV+ IE   + + R +KP     IA CGQL
Sbjct:    5 FFDMTIGGQPAGRIIMELFPDV-PKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIE--ATQTDRGDKPLSEVKIAKCGQL 169          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 1.552e-54
Identity = 102/167 (61.08%), Postives = 118/167 (70.66%), Query Frame = 2
Query:   44 KVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPGGIADCGQL 544
            KV+FD+ + G+ AG + + LF    P+TAENFRALCTGEKG+GKSGKPLHYKGS FHR+IP FM Q            ESIYG KFADENF  KHTGPG+LSM N+G  TNGSQFF+ T  T WLDG+HVVFG+VV+GMDVV  IE  G  SG       IAD G+L
Sbjct:   33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIA_DROME (Peptidyl-prolyl cis-trans isomerase OS=Drosophila melanogaster GN=Cyp1 PE=1 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 3.458e-54
Identity = 109/174 (62.64%), Postives = 122/174 (70.11%), Query Frame = 2
Query:   26 SKMPN-PKVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPGGIADCGQL 544
            SKM   P+VFFDMT   +P G I MEL +DV P+TAENFRALCTGEKG G       YKGS FHRVIP FMCQ            +SIYG+KF DENF  KHTG GILSM NAG  TNGSQFF+CT KT WLD KHVVFG+VVEG+DVVK IE  GS SG+T+K   +A+ G L
Sbjct:   61 SKMSTLPRVFFDMTADNEPLGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGANTNGSQFFICTVKTAWLDNKHVVFGEVVEGLDVVKKIESYGSQSGKTSKKIIVANSGSL 227          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.516e-54
Identity = 104/177 (58.76%), Postives = 123/177 (69.49%), Query Frame = 2
Query:   17 TNPSKMPNPKVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPGGIADCGQLS 547
            T+  K    +VFFD+T+GG+ AG I  EL+ D+ P+TAENFRALCTGEKG+GK GKPLHYKGS+FHRVI  FM Q            ESIYG+KF DENF  KH  P +LSM NAGPGTNGSQFFV T  T  LDGKHVVFG+V+ G  VV+ IE + +   +  K   IADCG+LS
Sbjct:    4 TDDVKQARSRVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKTQGDKPTKDAVIADCGELS 180          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Bos taurus GN=PPIF PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 7.703e-54
Identity = 103/163 (63.19%), Postives = 116/163 (71.17%), Query Frame = 2
Query:   26 SKMPNPKVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK 514
            S   NP V+ D+   GQP G + +EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ            +SIYGS+F DENF  KH GPG+LSM NAGP TNGSQFF+CT KT+WLDGKHVVFG V EGMDVVK IE  GS SG+T+K
Sbjct:   42 SSSGNPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFKLKHEGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSK 197          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.823e-53
Identity = 97/167 (58.08%), Postives = 117/167 (70.06%), Query Frame = 2
Query:   44 KVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPGGIADCGQL 544
            KVFFD+ +  +PAG I   L+    P+T ENFRALCTGEKG+G SGKPLHYK S FHR+IP FM Q            ESIYG KF DENF  KH+ PG+LSM NAGP TNGSQFF+ T  T WLDG+H VFG+V+EGMD+VK +E +GS SG  +K   I++ G+L
Sbjct:   31 KVFFDIEIDNKPAGRIVFGLYGKTVPKTVENFRALCTGEKGLGTSGKPLHYKDSKFHRIIPNFMIQGGDFTRGDGTGGESIYGKKFNDENFKIKHSKPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHTVFGEVIEGMDIVKLLESIGSQSGTPSKIAKISNSGEL 197          
BLAST of FC873113 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.823e-53
Identity = 102/167 (61.08%), Postives = 115/167 (68.86%), Query Frame = 2
Query:   44 KVFFDMTVGGQPAGTIGMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMENAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPGGIADCGQL 544
            KV+FD+ + G+ AG I M LF    P+T ENFRALCTGEKGIGK+GK LHYKGSSFHR+IP FM Q            ESIYG KFADENF  KHTGPG LSM NAG  TNGSQFF+ T  T WLDG+HVVFG+VV GMDVV  +E  G+ SG       I D G+L
Sbjct:   36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGEL 202          
The following BLAST results are available for this feature:
BLAST of FC873113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
PPIA_HEMPU9.722e-5763.16Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
PPI2_SYNY31.075e-5561.68Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
CYP5_RHIOR2.395e-5560.12Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizop... [more]
CYPX_USEUD1.552e-5466.67Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
CP19D_ARATH1.552e-5461.08Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
PPIA_DROME3.458e-5462.64Peptidyl-prolyl cis-trans isomerase OS=Drosophila ... [more]
PPID_NEUCR4.516e-5458.7641 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPIF_BOVIN7.703e-5463.19Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_DICDI3.823e-5358.08Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
CP20A_ARATH3.823e-5361.08Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CH01FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CH01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873113 ID=FC873113; Name=FC873113; organism=Citrus clementina; type=EST; length=595bp
TTGTTTTTTTCTTTTAACCAACCCATCAAAAATGCCAAACCCCAAAGTGT
TCTTCGACATGACCGTCGGCGGTCAGCCCGCCGGCACGATCGGGATGGAG
CTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTG
CACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGG
GCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGAC
TTCACCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCAAAATT
CGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCA
TGGAGAATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACG
GCCAAGACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGT
CGAAGGAATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCG
GAAGGACCAACAAGCCCGGCGGGATCGCTGATTGCGGTCAATTGTCTTAG
ATTTGATCATGATAATGATCGCCATCATCACGAGCCGACTGATCG
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