FC873125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYA_SOLTU (Phytochrome A OS=Solanum tuberosum GN=PHYA PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.675e-14 Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 1 Query: 1 KNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 225 +++ + LEFRI H G+PE+L+ MF AS EG+ L +S+KLVKLMNG VQY+REA RS+F+I +E +A Sbjct: 1045 ESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASEEGISLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVA 1119
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHY_ADICA (Phytochrome 1 OS=Adiantum capillus-veneris GN=PHY1 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.732e-14 Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 7 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 252 +H++H EFRI+H GI E L+ +M SQ + EGL + IS L++LMNG V+Y +A FL+ I+FPLAH+ DA + Sbjct: 1037 VHLMHFEFRISHSGQGISEALVEEMTNKSQKWTPEGLAISISCTLIRLMNGDVKYTTDAGNKCFLVTIQFPLAHRDDATSVR 1118
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYD_ARATH (Phytochrome D OS=Arabidopsis thaliana GN=PHYD PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.314e-14 Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 1 Query: 16 VHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPL 222 V LEFR+ G+P + + DMF+ S+ S EGLGL + +K++KLMNG VQYIRE ERS FLI+IE P+ Sbjct: 1087 VRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVIELPV 1155
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYA1_TOBAC (Phytochrome A1 OS=Nicotiana tabacum GN=PHYA1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.314e-14 Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 1 Query: 1 KNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 225 +++ + LE RI+H G+PE+L+ MF AS EG+ L IS+KLVKLMNG VQY+REA RS+F+I +E +A Sbjct: 1045 ESVQLALLEVRISHTGGGVPEELLSQMFGTEAEASEEGISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVA 1119
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYB_SORBI (Phytochrome B OS=Sorghum bicolor GN=PHYB PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.419e-13 Identity = 34/64 (53.12%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 28 FRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFP 219 FR T+P G+P ++ DMF +SQ +++EG+GL +K++KLM G VQYIRE+ERS FLI++E P Sbjct: 1104 FRFTYPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKILKLMGGEVQYIRESERSFFLIVLELP 1167
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYA_SOYBN (Phytochrome A OS=Glycine max GN=PHYA PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.419e-13 Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 1 Query: 1 KNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 240 K++H+V LE ITH G+PE L++ MF ++ S EG+ L I KL+KLMNG V+Y+REA +S+F++ E AH A Sbjct: 1052 KSVHLVKLELSITHGGSGVPEVLLNQMFGNNGLESEEGISLLIRAKLLKLMNGDVRYLREAGKSAFILSAELAAAHNLKA 1131
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYA_POPTM (Phytochrome A OS=Populus tremuloides GN=PHYA PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12 Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 25 EFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 231 + RI H GIPE L+ M+ GAS EG+ L IS+KLVKLMNG V+Y+REA +SSF+I +E H+ Sbjct: 1052 KLRIRHLGAGIPEALVDQMYGEDTGASVEGISLVISRKLVKLMNGDVRYMREAGKSSFIISVELAGGHK 1120
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYB_ORYSJ (Phytochrome B OS=Oryza sativa subsp. japonica GN=PHYB PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 28 FRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 231 FR P G+P +++ DMF +S+ ++EG+GL I +K++KLM G VQYIRE+ERS F I++E P Q Sbjct: 1097 FRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHIVLELPQPQQ 1164
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYB_ORYSI (Phytochrome B OS=Oryza sativa subsp. indica GN=PHYB PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 28 FRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 231 FR P G+P +++ DMF +S+ ++EG+GL I +K++KLM G VQYIRE+ERS F I++E P Q Sbjct: 1097 FRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHIVLELPQPQQ 1164
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYE_IPONI (Phytochrome E OS=Ipomoea nil GN=PHYE PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.044e-11 Identity = 31/68 (45.59%), Postives = 50/68 (73.53%), Query Frame = 1 Query: 16 VHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEF 216 +H++FR+THP G+P LI DM ++ ++EG+ L++SQKLV++MNG V Y+RE ++ FLI ++F Sbjct: 1031 IHIQFRMTHPGQGLPSALIEDMVRGGTRWTTQEGVVLHLSQKLVRMMNGHVHYVREQQKCYFLIDLDF 1098 The following BLAST results are available for this feature:
BLAST of FC873125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873125 ID=FC873125; Name=FC873125; organism=Citrus clementina; type=EST; length=828bpback to top |